Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1565g00008 ATGAATCCCAATCAACATAATACTTGGTCCAATTTTATGCAAAATGATGGAAATCCTCCTAGTATCCCAAATCAACAAAACAATCCATATTTTGGAAATCTACCTCTTATTCCAAATCCACACCATAATCCAAATTTTCAAAACTCTCTTTTTATCCCAAATCCACAAAATAATCCATCCATTAGAAATTACTCCTATGATACACCACCTTATCCATATCAATATCAACAATTTTCATCTCAATCAACTAACCCCAATATGCCTCATGTTGTTAAAATAGGTAGTAGTGGTGTGCAATCAAATGATCAAGAACATGAAACACCACAACTTTGCACTCAAGATAGCTTGGAAAATACTACACTTGGTGAAGATGTTGCATCTGCACCGGTTGTGAATGCGCCTAAACAAAGATTCCAACCGAAAGAAGATGAAATTCTCATTCATTCATGTCTCAACGTTTCAAAGGATTCAATTGTTGGAGTTGATCAAAAAGGAGATAGTTTCTGGAAGAGAATTGGTGAAGCATTTAACAAGCATCGTGACATGAATTACAAAGAGAGGAAACCGATGGCACTAAAAGGTAGATGGCACAAAATTAATCCATCTGTTCAAAAGTTTGTTGGATGCTACAAACAAGCATTTTCTACACAAAAAAGTGGGAGCTCCGAAAACAATAACATGCAGGCTGCGTATAGAATTTATTTTCAAGATGAAGGTGAAAAGTTTACATTTGAGTCTGCTTGGAGATTATTGAAAGATGAACCTAAATGGCTCGTAGGTTCATCAGAAGCTTCTGCAAAAAGAACAAAGAATTCAGCATCTGGAGCATATTCTTCTTCTAACCCACCGACACCAACGAGCAGCGAATACAATCCATCATCACCTACTCTGTTACGTCGTCCAATCGGTCAAAAGGCAGCCAAAAGGAAGGAGAAAGAAAAGATGGTGGAAATGTCTACTCCAAATGTTAAATATGATGAATTCAAAGATGAATTCAAAAAGAAAACTAATTTGATGTCAGTGTTTGCACAAGACTATGCACGTATTGAGAGTGAAAAACTCGAGATTGAAAGAAAAAAGGTTGAAGCAAAGATTAAGAAGGCCGAGATGAAAGAGGAAAGATTGAAGATTGATGATCTACAAATTGTCTCAAAGGATACATCAAATATGAATTCAAGACAACTACAAGCTCATGATTTATTGTGCGATGTGATTCGGAAAAATATGGCCTTAATTAATTGTATTATGTATTTTGAATATTTTTAG 1266 0.3539 MNPNQHNTWSNFMQNDGNPPSIPNQQNNPYFGNLPLIPNPHHNPNFQNSLFIPNPQNNPSIRNYSYDTPPYPYQYQQFSSQSTNPNMPHVVKIGSSGVQSNDQEHETPQLCTQDSLENTTLGEDVASAPVVNAPKQRFQPKEDEILIHSCLNVSKDSIVGVDQKGDSFWKRIGEAFNKHRDMNYKERKPMALKGRWHKINPSVQKFVGCYKQAFSTQKSGSSENNNMQAAYRIYFQDEGEKFTFESAWRLLKDEPKWLVGSSEASAKRTKNSASGAYSSSNPPTPTSSEYNPSSPTLLRRPIGQKAAKRKEKEKMVEMSTPNVKYDEFKDEFKKKTNLMSVFAQDYARIESEKLEIERKKVEAKIKKAEMKEERLKIDDLQIVSKDTSNMNSRQLQAHDLLCDVIRKNMALINCIMYFEYF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1565g00008 421 Coils Coil 346 378 - -
Vivi1565g00008 421 Pfam No apical meristem-associated C-terminal domain 241 394 IPR029466 -
Vivi1565g00008 421 MobiDBLite consensus disorder prediction 304 318 - -
Vivi1565g00008 421 MobiDBLite consensus disorder prediction 264 298 - -
Vivi1565g00008 421 MobiDBLite consensus disorder prediction 1 25 - -
Vivi1565g00008 421 MobiDBLite consensus disorder prediction 261 318 - -
Vivi1565g00008 421 PANTHER - 131 407 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1565g00008 133 313 Glutathione S-transferase Gene Family AT5G41240 38.421 1.03e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1565g00008 - - vvo:131642220 773.852