Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1565g00001 ATGGCAGTTGAATTCGTCGGTAGTGCTCTTCTTTCAGCTTCCCTTCAGGTTGCATTTGACAGACTCGCTTCTGCCGAAGTTGTTGAATACTTTCAAGGAACAAGATTCAATGATAAGCTACTGAAAAAACTCAACATCACGCTACTATCCATCAACGCTGTGCTTGACGATGCTGAACAAAAGCAGATCAGAAATCAACACGTGAAAGCATGGCTTGTTGCTGTCAAAGAGGCTGTGTTTGAAGGAGAAGATTTGTTAGATGATATTGAAATTCAAGTTTCCCGATGCAAACGCGAAGCTACCAAGGTGTGGAACTTCTTCTATGCTTCTACAAATTCATTTGACAAAGAAATTGAATCCAAGATGCAACAAGTACTTGACAGGCTAGAATATCTTGCAAGCAAAAAGGATATACTTGGTTTAAAAGTGGCTAGTATTGGTTATGGTGTTGGATCGAGGTCGAAAAAACTACCAACAACTTGTTTGCTTGGTGAGACTGTTTTATATGGTAGAGTTCTTGACAGAGAAATTCTATTTCACTGGTTGATATCTCATACTGACAATAAAAATCAGTTTTCTGTGGTTTCTATTGTTGGTATGGGTGGGATGGGTAAGACCTTGCTCGCGCAACACCTGTACAATGAATCAAAGATGGTGGATGAATTTGATGTTAAAGCTTGGGTCTGTATTTCGGACGAATTTGATGTTTTCAAGATAACAAGATCTATTCTTGAGGGTATCGTTGGATCGACCGATGATAGTAGAGAGTTAAATATGGTTCAAGAAAGGTTGAAGGAAAAACTGACAGGAAAAAGATTTCTTCTTGTTTTGGATGATGTATGGAACGAAAACCGTGATCAATGGGAAGCTTTGCAAACTCCTTTTAATTATGGAGCTCAAGGAAGCAAAATTTTAGTCACTACGCGTAGTATGGAAGTTGCTTATTCTTCCATGCGATCGGCTAAAATACATCAACTAGAGAAATTAGAAGAAGAGCATTGCTGGAAGTTGTTTTCCAAACATGCATTCCTAGATGAAAATCCTCAATTGAATCCTGAGATGTTAGAGATTGCTAAAAAGATAGTTGGAAAATGCAAAGGGTTGCCTTTAGCCTTGAAAACAATTGGAAGTCTCTTGTACACAAAATCGTCTTTGGTGGAATGGAAAACGATATTGGCAAGCGAGATATGGGACTTACCTGAAGAGGTTAGCAATATCCTCCCCGCTTTAAGACTAAGCTATCACCATCTTCCTTCTCATTTGAAGAGATGCTTTTCTTATTGTTCATTATTCCCGAAAGATTATGTGTTTGAAAAGGAGTATTTGATTTTATTATGGATGGCTGAAGATTTTCTACCATATCCTCAACTTCAACAGGGTAAGAGTATGGAAGAAGTTGGAGAACAATACTTCGATGATCTGTTGTCAAGATCTTTTTTTCAACAATCAAGCAAAGACAAAATGTGTTTTGTCATGCATGACCTTCTCAATGATCTAGCAACATATGTGTCTGGTGATTTTTGCTTCAGGCTGGAAGTTGAAGAATCACAAAATATATCGAAAGTTACTCGCCATTTTTCGTTTTTGAGAAATAGATATGAATCGTCTAAAAGGTTTGAGGCCTTATGTAAAGCTGAAAATTTGCGTACATTTCTACCATTTAGTAGAAACTACACAGTACCATCGCCTTTTCCTTTTGAATTCTGGATGTCTGGCCTTTTGGTGCATGACTTGCTTCCCAAGTTTAAGGTCTTACGCGTGTTATCTTTGTCGGGATACTGCAATGTGACTGATGTTCCTGACACAATAGGAAATCTTAAACATCTTCGTTATCTTGACCTTTCTGAAACCAACATAAAGAAGTTACCTGATTCAATATGTTTTCTCTATAACTTGCGAATACTAAAGTTGAAGAATTGCCGATTTTTGAAGGAGCTGCCTTTGAATTTTCATCAACTGACTAACTTACGTTTTCTTGATTTTAGTGGAACTAAGGTGAGGAGTATGCCAATGCATTTTGGAAAATTGAAGAATCTTCAAGTGCTGAATTCATTCTATGTAGGAAAAGCTAGTGAGTTCGAGTCTAATATTCAACAGTTAGGCGAACTCGATCTTCGAGGAGCACTATCAATTTCAGAGTTGCAGAATATTGTCAATCCCTTTGATGCATTAGCAACAAATTTGAAAAACAAAGTACACCTTGTGAACCTACATTTAGAATGGAATACAGAGAATGAAAACTCACAACAAGAAAGGGAAGTGCTTGAGAAGCTACAACCATCAGAACACTTGAAGGAGTTGTCAATCCGGAGCTATGGTGGAACAAGATTTCCAGATTGGTTTGGAGATAATTCACTATCTACTTTAGTATCCTTGAAGTTGAGTAACTGTGAAAAATGTATCTCGTTGCCTCCACTTGGAATTTTACTATCTCTCAAGAAACTATGCATTTTTGGGCTCTCTGGCGTGGTGGTTATTGGCACCGAGTTTTATGGGAGTAGCTTTTCAACTGTTCCATTTCCATCTTTGGAAACCTTAGAATTTGAGGACATGGAGGAATGGGAAAAATGGGAATGCATAACTGCGACAAATGCTTTTCCACATCTTCAAAAGCTTTCTATAAAAAACTGTTCAAATCTAAGGGAGTGTTTGCCTGAGAAACTTCCTTGTTTAACGGTGCTAGAAATTTCTCATTGTGAACAGCTTGTGGCTTCTGTTCCTAGGACTCCATTCATTCATGCATTATTTCTAAACAATTGTGGAGAGCTTCAATTTGATTATCATCCATCTACTTTGAAAATTCTGAAGATCGATGGATACTGCATGGATGGATCACTTCACAGGGTTGAGTCTATCATATCCAATGTCTCTCTTGAAAGAATGAAGATTAACCGTTGCCCTGAAATGAACATTCCAAAACAGTGTTGCTACAACTTCCTTGTAACATTATACATCTGGAGTAGTTGTGACTCTCTAACTACATTTCCTCTTGATTTGTTTCCAAAACTCAAGGAGCTTACATTCAGAGACTGTGCTAATCTTGAGACGATTTCACAAGAGAGTGCTCACAGTCACAATCTCCAAATGTTGCAAATTTCTAACTGTCCTAAATTTGTGTCATTTCCAAGAGGAGGATTCAATGCACCCGGGTTATTGGTCTGTCAATTACATAAATTAGAGAACTTGAAATCATTGACTGAATGCATGCACAGTCTCCTTCCATCAATGTCTTTTCTAGTTGTACTAGATTGTCCACAACTCGAGCTGTTATCTAATGGAAGTTTGCCATCAAACTTGAAATCATTGTATCTCCGAAATTGTTCCAAGCTTTTGGAAACACTGAAACGCGCTTTGGCAACTACCACCTCTCTCTTTTCTTTGTATATCGGAGAAGGTTTCATGGAGTCTTTTCCTGAGCAAGGGCTGCTTCCGCATTCTCTTAGTTCTCTATCCATCACTTGGTGTCCAAATCTTAAAAAACTCAATTACTCGGGTCTCTGCCATCTTTCCTCTCTTACAAGATTGTATATATCTAGCTGCCCCGTACTCCGATGCTTACCTGATGAGGGTCTTCCCAAATCCATTTCTACTCTACAGATTTGGGGCAACTGTCCGTCGCTCAAACGCCGTTTTCAGAAACCAAATGGTGAAGATTGGGAGAAGATTCGTCACATTCAAAGCATAATAATTGACGACGACATAATAACATAA 3711 0.3826 MAVEFVGSALLSASLQVAFDRLASAEVVEYFQGTRFNDKLLKKLNITLLSINAVLDDAEQKQIRNQHVKAWLVAVKEAVFEGEDLLDDIEIQVSRCKREATKVWNFFYASTNSFDKEIESKMQQVLDRLEYLASKKDILGLKVASIGYGVGSRSKKLPTTCLLGETVLYGRVLDREILFHWLISHTDNKNQFSVVSIVGMGGMGKTLLAQHLYNESKMVDEFDVKAWVCISDEFDVFKITRSILEGIVGSTDDSRELNMVQERLKEKLTGKRFLLVLDDVWNENRDQWEALQTPFNYGAQGSKILVTTRSMEVAYSSMRSAKIHQLEKLEEEHCWKLFSKHAFLDENPQLNPEMLEIAKKIVGKCKGLPLALKTIGSLLYTKSSLVEWKTILASEIWDLPEEVSNILPALRLSYHHLPSHLKRCFSYCSLFPKDYVFEKEYLILLWMAEDFLPYPQLQQGKSMEEVGEQYFDDLLSRSFFQQSSKDKMCFVMHDLLNDLATYVSGDFCFRLEVEESQNISKVTRHFSFLRNRYESSKRFEALCKAENLRTFLPFSRNYTVPSPFPFEFWMSGLLVHDLLPKFKVLRVLSLSGYCNVTDVPDTIGNLKHLRYLDLSETNIKKLPDSICFLYNLRILKLKNCRFLKELPLNFHQLTNLRFLDFSGTKVRSMPMHFGKLKNLQVLNSFYVGKASEFESNIQQLGELDLRGALSISELQNIVNPFDALATNLKNKVHLVNLHLEWNTENENSQQEREVLEKLQPSEHLKELSIRSYGGTRFPDWFGDNSLSTLVSLKLSNCEKCISLPPLGILLSLKKLCIFGLSGVVVIGTEFYGSSFSTVPFPSLETLEFEDMEEWEKWECITATNAFPHLQKLSIKNCSNLRECLPEKLPCLTVLEISHCEQLVASVPRTPFIHALFLNNCGELQFDYHPSTLKILKIDGYCMDGSLHRVESIISNVSLERMKINRCPEMNIPKQCCYNFLVTLYIWSSCDSLTTFPLDLFPKLKELTFRDCANLETISQESAHSHNLQMLQISNCPKFVSFPRGGFNAPGLLVCQLHKLENLKSLTECMHSLLPSMSFLVVLDCPQLELLSNGSLPSNLKSLYLRNCSKLLETLKRALATTTSLFSLYIGEGFMESFPEQGLLPHSLSSLSITWCPNLKKLNYSGLCHLSSLTRLYISSCPVLRCLPDEGLPKSISTLQIWGNCPSLKRRFQKPNGEDWEKIRHIQSIIIDDDIIT 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1565g00001 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 428 IPR027417 -
Vivi1565g00001 1236 SUPERFAMILY L domain-like 917 1222 - -
Vivi1565g00001 1236 Coils Coil 41 61 - -
Vivi1565g00001 1236 Gene3D - 15 129 - -
Vivi1565g00001 1236 Gene3D - 161 323 IPR027417 -
Vivi1565g00001 1236 FunFam Probable disease resistance protein At1g61300 164 322 - -
Vivi1565g00001 1236 SUPERFAMILY L domain-like 491 911 - -
Vivi1565g00001 1236 Pfam NB-ARC domain 187 413 IPR002182 GO:0043531
Vivi1565g00001 1236 Gene3D Ribonuclease Inhibitor 1050 1219 IPR032675 -
Vivi1565g00001 1236 Gene3D Ribonuclease Inhibitor 884 1049 IPR032675 -
Vivi1565g00001 1236 ProSiteProfiles Leucine-rich repeat profile. 608 629 IPR001611 GO:0005515
Vivi1565g00001 1236 Pfam Rx N-terminal domain 11 103 IPR041118 -
Vivi1565g00001 1236 PANTHER DISEASE RESISTANCE PROTEIN RP 41 886 IPR044974 GO:0006952
Vivi1565g00001 1236 FunFam Probable disease resistance protein At1g63360 414 502 - -
Vivi1565g00001 1236 Gene3D - 328 418 IPR042197 -
Vivi1565g00001 1236 Gene3D - 419 501 IPR036388 -
Vivi1565g00001 1236 Gene3D Ribonuclease Inhibitor 540 883 IPR032675 -
Vivi1565g00001 1236 PRINTS Disease resistance protein signature 267 281 - -
Vivi1565g00001 1236 PRINTS Disease resistance protein signature 365 379 - -
Vivi1565g00001 1236 PRINTS Disease resistance protein signature 194 209 - -
Vivi1565g00001 1236 PRINTS Disease resistance protein signature 886 902 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1565g00001 195 848 WRKY Transcription Factor Family AT5G45050 23.960 6.72e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1565g00001 - - gmx:100781012 1350.5