Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1551g00004 ATGGATGATTTAACAAGCAAGAATGAGAATGGTGAAAGGCTTATAATGTTGTTTGGGGTGAATATCGCAGCAAAACGCTCTAAAGTTAATGACACGACCATGAATCATAGTTTTAACACTCAGGATGAAAATCAAAAAGATGACGAGAGGAATGAAAATCATGATTCTGGTCGAAGCTTCGATGGTGAAAACCAACAAATTGTGAAAAATTGGACAATGAATGAACACAAGGCGTTTTTGGAAGGTTTAAAAACTTTTGGGAAAGGTAAATGGAAGGATATATCAAGTAACTATGTGAAGACGAAGAATGCTACTCAAGTTGCCAGTCATGCACAAAAGTTTTTTCTCAGACTAAAAGGAATTAGAAAAACCAAGCGCAAGAGCATCTTCGACATGAAGCTTGATTATGAAGATTCAAAAACTCCAAGTCCTTCTCCTTCGCTGATATTGTCCCCCGGCAACTCTATTTAG 471 0.3715 MDDLTSKNENGERLIMLFGVNIAAKRSKVNDTTMNHSFNTQDENQKDDERNENHDSGRSFDGENQQIVKNWTMNEHKAFLEGLKTFGKGKWKDISSNYVKTKNATQVASHAQKFFLRLKGIRKTKRKSIFDMKLDYEDSKTPSPSPSLILSPGNSI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1551g00004 156 ProSiteProfiles SANT domain profile. 66 119 IPR017884 -
Vivi1551g00004 156 PANTHER TRANSCRIPTION FACTOR KUA1 14 136 - -
Vivi1551g00004 156 MobiDBLite consensus disorder prediction 32 65 - -
Vivi1551g00004 156 MobiDBLite consensus disorder prediction 140 156 - -
Vivi1551g00004 156 SUPERFAMILY Homeodomain-like 70 120 IPR009057 -
Vivi1551g00004 156 MobiDBLite consensus disorder prediction 137 156 - -
Vivi1551g00004 156 MobiDBLite consensus disorder prediction 41 59 - -
Vivi1551g00004 156 Gene3D - 69 122 - -
Vivi1551g00004 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 119 IPR017930 -
Vivi1551g00004 156 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Vivi1551g00004 156 SMART sant 67 117 IPR001005 -
Vivi1551g00004 156 NCBIfam myb-like DNA-binding domain, SHAQKYF class 70 117 IPR006447 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi1551g00004 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1551g00004 - - psat:127093981 185.267