Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1536g00001 ATGACCCTTGCGAGCCTCCGGGTATTTGTGCTCAGTGTTGCAACATCTATTTGGATGCCAGTTTCCCGACAAATACTGTTTGATTTTCTGCGTGATGAACGCCTTAGAAGCAAGTGGGACATTTTGTCAAATGGCAGAACAATCCAAGAAATGATTCACCTTTCTAAAGGTCAAGGACAAGGAAATTATGTTTCTGTCCTTCACGCTAATGCCCTTAATGCGAACGATAGCAGCATGTTGATTCTTCAAGAGACGTGGATGGATGCGTCTTGTTCCGTGGTGGTCTATGCACCGGTTGACTCGCAATCATTGAACGCAGTAATGAGCGGTGGAGATTCTGCATATGTTGCATTCTTGCCTTCGGGCTTTGCCATTCTTCCTGATGGTAATAAATCCTCTAGCTATGGTGGATCATATGAGACTTCACAAGAAGGCGACGGAGGTGGAAGTTTGCTAACCGTTGGATTCCAAGTTCTGGTCAATAGTCTTCCAACTCCCAAGATCATAATGGAATCTGTGGACACCGTGAATAATCTTATCTCATGCACCATTCAGAAGATCAAAGTTGCACTAAGAGATACATAA 585 0.4393 MTLASLRVFVLSVATSIWMPVSRQILFDFLRDERLRSKWDILSNGRTIQEMIHLSKGQGQGNYVSVLHANALNANDSSMLILQETWMDASCSVVVYAPVDSQSLNAVMSGGDSAYVAFLPSGFAILPDGNKSSSYGGSYETSQEGDGGGSLLTVGFQVLVNSLPTPKIIMESVDTVNNLISCTIQKIKVALRDT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1536g00001 194 SUPERFAMILY Bet v1-like 10 186 - -
Vivi1536g00001 194 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 9 191 IPR042160 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1536g00001 9 191 Homeobox Transcription Factor Family AT3G61150 62.766 3.19e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1536g00001 K09338 - vvo:131642145 380.948