Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1534g00003 ATGTCGTTCGACAATCAACTATTTTGGATGGGGAAGAGTTACGGGAATTTGAATGACAGTGATGACTTGACATATGATAATTCTAGAATCGAGTCAAAGAGGTCTAATCAGTGGTTTGTGGATGGCCCTGAAATGGATCTGTCTCCCAATAAGAAACAAGCAGTAGAGGGTCCCAACAGTTTATCGCCAGGGTTGCTCAACTCCAATATTTCGTCATGGGGAGATTCTTTAACTTTTCACTCTTTAACTGGCCATTTTACTGCGCCACTATTTGATCCAGGGGCTGCATCTATGAATTTTGAAGACGTAAGCATTTGCCCTTTGAACATAGATAATAAGTTGAGTGCGGAAAGAAAGAGTATCTTGGATCCTTTTGGGGGTGATGCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATTCTCAACCAGTTTTTAGTAATCCCTGTGATGGAGTTAGCAACACCGTGTCGCACACTCATGCATCCAAGGAAGGTGACAATTCAATGTCAACAAGCCTCACATTCAACAATGGGGATGCCAATGTAACATTGGTTGACGATGCTTTTGATAGGATGGATAACAATATAATGTCAACGAGTCAAACTTATAACAAGGGAGATGGCAACTTATCAGTACCTCCGACGTACAAAGAGATTTGCAACACAATATCAATGGATCAAGGATACATTAATGTAGATAGTGATGCAATGTCTATTGCTCAAGCTTATAACAAGGCCTGTGATAATTCTATGTTGAGTAACCACTTATTCAATAAGGTTGAAGATGATACCATATTGATGGGTCAGACTTACCATCAGAGACGAAATGACTTGTCATTTGTTCCTCATTCTTATAATAAAGGAGAAAGCACTATCATATCCTTTGGTGGCTGTGATGATGACGATGCAATTCAATCTGACTCGTTTGTTTCTGACTACGCCCTGTTTATGGGTCAAGCACCTTCACATATGTCACAAGTTGCAAATGAAAAAGAGTTGGTTAGATCAAGCTCTAAACTAATTCCAAGTACAGCCCAGATGTCTGCGTCAGAAGCTGAAAATGTTCCCAGGACAAAAGAGGAGATGAAAATGTCTAAAAAAGCTACTTCAAATAACTTCCCTTCGAACGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTAAAGTATAAAGCATGGTCACGGGAGGAACTTCGAGCTGTTATTAAAGGTGCTGGGTATTTGTGCAGTTGTCCGTCGTGTAATTTTTCTAAAGTTATTAACGCATACGAGTTTGAGCGGCATGCTGGTTGCAAAACAAAGCACCCAAATAATCATATTTACTTTGAGAATGGTAAAACCATATATGGAGTGGTACAAGAGCTCAGGAGCACTCCACAGAATATGTTATTTGAAGTTATTCAGACAATAACTGGTTCACCTATCCATCAGAAATCCTTCCGGATTTGGAAAGAATCCTTTTTGGCTGCAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATTAA 1518 0.4018 MSFDNQLFWMGKSYGNLNDSDDLTYDNSRIESKRSNQWFVDGPEMDLSPNKKQAVEGPNSLSPGLLNSNISSWGDSLTFHSLTGHFTAPLFDPGAASMNFEDVSICPLNIDNKLSAERKSILDPFGGDASFGLSMSTTLEDSQPVFSNPCDGVSNTVSHTHASKEGDNSMSTSLTFNNGDANVTLVDDAFDRMDNNIMSTSQTYNKGDGNLSVPPTYKEICNTISMDQGYINVDSDAMSIAQAYNKACDNSMLSNHLFNKVEDDTILMGQTYHQRRNDLSFVPHSYNKGESTIISFGGCDDDDAIQSDSFVSDYALFMGQAPSHMSQVANEKELVRSSSKLIPSTAQMSASEAENVPRTKEEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREELRAVIKGAGYLCSCPSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQNMLFEVIQTITGSPIHQKSFRIWKESFLAAARELQRICGKD 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1534g00003 505 PANTHER AUTOIMMUNE REGULATOR 9 451 - -
Vivi1534g00003 505 Pfam Tify domain binding domain 405 459 IPR032308 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1534g00003 355 491 PHD Transcription Factor Family AT3G53680 55.072 8.29e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1534g00003 - - mtr:25484103 802.742