Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1534g00002 ATGTCGTTCGACAATCAACTATTTTGGATGGGGAAGAGTTACGGGAATTTGAATGACAGTGATGACTTGACATATGATAATTCTAGAATCGAGTCAAAGAGGTCTAATCAGTGGTTTGTGGATGGCCCTGAAATGGATCTGTCTCCCAATAAGAAACAAGCAGTAGAGGGTCCCAACAGTTTATCGCCAGGGTTGCTCAACTCCAATATTTCGTCATGGGGAGATTCTTTAACTTTTCACTCTTTAACTGGCCATTTTACTGCGCCACTATTTGATCCAGGGGCTGCATCTATGAATTTTGAAGACGTAAGCATTTGCCCTTTGAACATAGATAATAAGTTGAGTGCGGAAAGAAAGAGTATCTTGGATCCTTTTGGGGGTGATGCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATTCTCAACCAGTTTTTAGTAATCCCTGTGATGGAGTTAGCAACACCGTGTCGCACACTCATGCATCCAAGGAAGGTGACAATTCAATGTCAACAAGCCTCACATTCAACAATGGGGATGCCAATGTAACATTGGTTGACGATGCTTTTGATAGGATGGATAACAATATAATGTCAACGAGTCAAACTTATAACAAGGGAGATGGCAACTTATCAGTACCTCCGACGTACAAAGAGATTTGCAACACAATATCAATGGATCAAGGATACATTAATGTAGATAGTGATGCAATGTCTATTGCTCAAGCTTATAACAAGGCCTGTGATAATTCTATGTTGAGTAACCACTTATTCAATAAGGTTGAAGATGATACCATATTGATGGGTCAGACTTACCATCAGAGACGAAATGACTTGTCATTTGTTCCTCATTCTTATAATAAAGGAGAAAGCACTATCATATCCTTTGGTGGCTGTGATGATGACGATGCAATTCAATCTGACTCGTTTGTTTCTGACTACGCCCTGTTTATGGGTCAAGCACCTTCACATATGTCACAAGTTGCAAATGAAAAAGAGTTGGTTAGATCAAGCTCTAAACTAATTCCAAGTACAGCCCAGATGTCTGCGTCAGAAGCTGAAAATGTTCCCAGGACAAAAGAGGAGATGAAAATGTCTAAAAAAGCTACTTCAAATAACTTCCCTTCGAACGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTAAAGTATAAAGCATGGTCACGGGAGAAGGAACTTCGAGCTGTTATTAAAGGTGCTGGGTATTTGTGCAGTTGTCCGTCGTGTAATTTTTCTAAAGTTATTAACGCATACGAGTTTGAGCGGCATGCTGGTTGCAAAACAAAGCACCCAAATAATCATATTTACTTTGAGAATGGTAAAACCATATATGGAGTGGTACAAGAGCTCAGGAGCACTCCACAGAATATGTTATTTGAAGTTATTCAGACAATAACTGGTTCACCTATCCATCAGAAATCCTTCCGGATTTGGAAAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATTAA 1503 0.4012 MSFDNQLFWMGKSYGNLNDSDDLTYDNSRIESKRSNQWFVDGPEMDLSPNKKQAVEGPNSLSPGLLNSNISSWGDSLTFHSLTGHFTAPLFDPGAASMNFEDVSICPLNIDNKLSAERKSILDPFGGDASFGLSMSTTLEDSQPVFSNPCDGVSNTVSHTHASKEGDNSMSTSLTFNNGDANVTLVDDAFDRMDNNIMSTSQTYNKGDGNLSVPPTYKEICNTISMDQGYINVDSDAMSIAQAYNKACDNSMLSNHLFNKVEDDTILMGQTYHQRRNDLSFVPHSYNKGESTIISFGGCDDDDAIQSDSFVSDYALFMGQAPSHMSQVANEKELVRSSSKLIPSTAQMSASEAENVPRTKEEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRAVIKGAGYLCSCPSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQNMLFEVIQTITGSPIHQKSFRIWKARELQRICGKD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1534g00002 500 Pfam Tify domain binding domain 406 460 IPR032308 -
Vivi1534g00002 500 PANTHER AUTOIMMUNE REGULATOR 9 452 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1534g00002 355 490 PHD Transcription Factor Family AT3G53680 54.412 1.11e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1534g00002 - - mtr:25484103 792.341