Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1534g00001 ATGTCGTTCGACAATCAACTATTTTGGATGGGGAAGAGTTACGGGAATTTGAATGACAGTGATGACTTGACATATGATAATTCTAGAATCGAGTCAAAGAGGTCTAATCAGTGGTTTGTGGATGGCCCTGAAATGGATCTGTCTCCCAATAAGAAACAAGCAGTAGAGGGTCCCAACAGTTTATCGCCAGGGTTGCTCAACTCCAATATTTCGTCATGGGGAGATTCTTTAACTTTTCACTCTTTAACTGGCCATTTTACTGCGCCACTATTTGATCCAGGGGCTGCATCTATGAATTTTGAAGACGTAAGCATTTGCCCTTTGAACATAGATAATAAGTTGAGTGCGGAAAGAAAGAGTATCTTGGATCCTTTTGGGGGTGATGCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATTCTCAACCAGTTTTTAGTAATCCCTGTGATGGAGTTAGCAACACCGTGTCGCACACTCATGCATCCAAGGAAGGTGACAATTCAATGTCAACAAGCCTCACATTCAACAATGGGGATGCCAATGTAACATTGGTTGACGATGCTTTTGATAGGATGGATAACAATATAATGTCAACGAGTCAAACTTATAACAAGGGAGATGGCAACTTATCAGTACCTCCGACGTACAAAGAGATTTGCAACACAATATCAATGGATCAAGGATACATTAATGTAGATAGTGATGCAATGTCTATTGCTCAAGCTTATAACAAGGCCTGTGATAATTCTATGTTGAGTAACCACTTATTCAATAAGGTTGAAGATGATACCATATTGATGGGTCAGACTTACCATCAGAGACGAAATGACTTGTCATTTGTTCCTCATTCTTATAATAAAGGAGAAAGCACTATCATATCCTTTGGTGGCTGTGATGATGACGATGCAATTCAATCTGACTCGTTTGTTTCTGACTACGCCCTGTTTATGGGTCAAGCACCTTCACATATGTCACAAGTTGCAAATGAAAAAGAGTTGGTTAGATCAAGCTCTAAACTAATTCCAAGTACAGCCCAGATGTCTGCGTCAGAAGCTGAAAATGTTCCCAGGACAAAAGAGGAGATGAAAATGTCTAAAAAAGCTACTTCAAATAACTTCCCTTCGAACGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTAAAGTATAAAGCATGGTCACGGGAGAAGGAACTTCGAGCTGTTATTAAAGGTGCTGGGTATTTGTGCAGTTGTCCGTCGTGTAATTTTTCTAAAGTTATTAACGCATACGAGTTTGAGCGGCATGCTGGTTGCAAAACAAAGCACCCAAATAATCATATTTACTTTGAGAATGGTAAAACCATATATGGAGTGGTACAAGAGCTCAGGAGCACTCCACAGAATATGTTATTTGAAGTTATTCAGACAATAACTGGTTCACCTATCCATCAGAAATCCTTCCGGATTTGGAAAGAATCCTTTTTGGCTGCAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATTAA 1521 0.4017 MSFDNQLFWMGKSYGNLNDSDDLTYDNSRIESKRSNQWFVDGPEMDLSPNKKQAVEGPNSLSPGLLNSNISSWGDSLTFHSLTGHFTAPLFDPGAASMNFEDVSICPLNIDNKLSAERKSILDPFGGDASFGLSMSTTLEDSQPVFSNPCDGVSNTVSHTHASKEGDNSMSTSLTFNNGDANVTLVDDAFDRMDNNIMSTSQTYNKGDGNLSVPPTYKEICNTISMDQGYINVDSDAMSIAQAYNKACDNSMLSNHLFNKVEDDTILMGQTYHQRRNDLSFVPHSYNKGESTIISFGGCDDDDAIQSDSFVSDYALFMGQAPSHMSQVANEKELVRSSSKLIPSTAQMSASEAENVPRTKEEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRAVIKGAGYLCSCPSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQNMLFEVIQTITGSPIHQKSFRIWKESFLAAARELQRICGKD 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1534g00001 506 PANTHER AUTOIMMUNE REGULATOR 9 452 - -
Vivi1534g00001 506 Pfam Tify domain binding domain 406 460 IPR032308 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1534g00001 355 492 PHD Transcription Factor Family AT3G53680 55.072 1.34e-44 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1534g00001 - - mtr:25484103 809.29