Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1524g00001 ATGGCGACCTCTTTCAATCCACCAATCGCCTTTCGCTTCCTCAAATCTCCACTTTCCTCTTTTCCCTTATCACCATCCTCACTTCCCCAATCGCATTGCACCTTCAAATTCCCAACCACTCGCTGCCGTTACTCATCTCTTGAAGTTAAAGATGTTAGTTATCAACCTCCAGGGACTCAGCTTAACCTTCTCAATTCGGTTAGTTTTTCGCTTCCGGAGAAAAGTTTTGGTCTAATTTTTGGACAGAGTGGAAGCGGAAAAACAACACTATTGCAGCTTCTTGCTGGAATAAGCAAACCAACATCTGGATCTATTTACATCCAAAAATATGGGGATGATGGAAATCCTAGTCAATCTCCGGAGCCATTGGTGCCAGAAAGGGTCGGTATTGTCTTCCAGTTTCCAGAGAGGTATTTTGTTGCTGATACTGTACTTGAAGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAATGATCAATTAAGGGAGAAACTTGCTCTAGGGCTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATATCATTGGATAAGAATCCTCACTCCCTCAGCGGTGGTTACAAACGTCGCCTTGCCTTGGCCATACAGTTAGTGCAAGTCCCTGATTTATTAATACTGGACGAGCCTCTTGCTGGACTTGAGAGTTTGCGAGTCTAG 678 0.4454 MATSFNPPIAFRFLKSPLSSFPLSPSSLPQSHCTFKFPTTRCRYSSLEVKDVSYQPPGTQLNLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGDDGNPSQSPEPLVPERVGIVFQFPERYFVADTVLEEVTFGWPRQKGNDQLREKLALGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQVPDLLILDEPLAGLESLRV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1524g00001 225 CDD ABC_cobalt_CbiO_domain1 48 220 IPR015856 GO:0005524|GO:0016020|GO:0055085
Vivi1524g00001 225 FunFam ABC transporter I family member 11 chloroplastic 37 223 - -
Vivi1524g00001 225 PANTHER HEAVY METAL TRANSPORTER 47 220 - -
Vivi1524g00001 225 Pfam ABC transporter 64 218 IPR003439 GO:0005524
Vivi1524g00001 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 222 IPR027417 -
Vivi1524g00001 225 Gene3D - 36 224 IPR027417 -
Vivi1524g00001 225 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 225 IPR003439 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1524g00001 47 222 Calmodulin-binding Proteins AT2G36910 26.776 1.83e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1524g00001 - - vun:114196181 339.347