Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1508g00001 ATGACGAGTTTTCTAATTGATTACGCGAAGAAAAATGTGGAGAAATCGTTAGATGGAGTGCTGAAAGAACTACGTTATATATGTTGTTTCACTTGCATTGCTAAGGAATTTGAAGAAGAAAAAACTTGGTTGGAAGCGGAAAGAACAACTGTTGGGCAACGTGTTAAAGTTGCAAAAAGAAGAGGAGATGACGTTCAAGATAATGTTATTTTTTGGGAAGAAGAAGCTGATAAGATCTTTCAAGAAGACACCAAAATAAATAAAAAATGTTTTTTTGGATTATGTCCTGATTGCATATGGCGATATAGAAAGGGAAAGGAATTGGCAAATAAGAAGGACCAAATAAAAAAACTTATGAAAACCGGAAAGGAACTTGAAATTGGACTCCCTGCCCCTCTTCCAGATGTTGACCGATATTCATCCCGACACTATATTTCTTTTAAAAGTAGAGAATCGAAATGTAAAGAGCTTTTGGATGCACTAAAAGATGACAACAATTATATAGTCGGTTTGCAAGGAATGGGCGGCACTGGAAAGACTACATTGGCCAAAGAAGTGGGTAAGAAACTTAAGCAATCCAAACAATTTACATACATTATTGATACAACAGTGTCATTTTCTCCAAATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGACGTTTGATGGATGTAGTGAATCAGACCGATCCAAAAAACTTTGGAAAGGATTAACCAGTGGTGAAAAAATTCTTCTAATATTGGATGATGTTTGGGGAGATATTGATTTTGAAGAAATAGGGATTCCCTATAGTGACAATCACAATGGTTGTAGAATTCTTGTAACCACACGCAATGTGTTGGTATGCAACAAATTAGAATGCAGTAAGACAATCAGATTGGAGTTCTTGTCTCAAGACGATGCATGGGAAATGTTCAAACGACATGCTAGTCTGACTGAAATTTCAACTAAAAGTTTGCTCGACAAGGGTTTTAAAATTGCAAATGAATGCCAAGGATTACCAATTGCAATTGCTGTTATCGCAAGTAGTTTGAAGGGAAAACATCAGGTAGAATGGGATGTTGCCTTAAAATCCTTGAAGAAGCATGCACCGATACACGAAATTGATGATGATTTGGTTAAAATATATGAATGCTTGAAGTTTAGCTATGATAATATGAATGATGGAAAGTCCAAAAGACTATTCCTTTTATGTTCTGTATTTCCAGAAGATGAAGAAATTCCTACTGAAAGGTTGATGAGACTTGGCATAGGAGCAGGTCTTTTTGGGGAAAATTATCGCAACTACGAAGATGCTCGAAGTCAAGTAGTTATATCAAAAAAAAAACTCCTAGATTCTTGTTTATTGTTGGAGGTCGATCAAGATAGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGCAAAGAAAGAGATTCAAACAATAAAGTTGTATGATAAAAAACAAAAGGCAATGGTTGAAAGGGAGAAGAATATTAAATATTTGTTTTGCAAAGGAAAGCTAAAGGAGGTGCTTTCCTGCAAGCTTGATAGTTCAAAGCTCCAGATTCTAATTGTCAGTATGGATATGGACGTAGATTATCGCAACCATGAGAAATTCGAAGTCCCAAATTCATTTTTTGAAAATATTAGTGGCCTTCGAGTGTTTCATTTGTTGATTAATTACTTTGATCCAGTAACTATATCATTACCACAATCATTTCAATCGTTGAAGAATATTCGCTCTCTACTTTTTCAGAATGTTGATTTGGGTGATATCTCTATTTTGGAAAATCTGCAAAGTCTTGAGACATTTGAATTGGAACTGTGTACAATTAATGAATTGCCAGAAGGACTTGCAAAACTACAGAATCTTATTTTGTTGAAATTGCTTGGTTGTATAATTATAGAGAATAATCCATTTAAAGTGATTGAAGGATGCTCCTCACTTGAAGAGTTGTATTTCGTAGGCAGTTTTAATGATTATTGCCGAGAAATATCCTTACCAATGTTACAAAGATTTATATTGGATGATGGTTGGAGGATTGTGAATGATTCAGTATCAAAATGTGTATCTCTTTTACATCATGAAAATAAATATATACTCTCCAAAAAACAACTCAAAGAGTATATACAAGTAGTAGAGGCTATTGGACTAAGAGGAATCTGGGGGGAATGGGTAAATATCATACCTGAAATTGTTCCTATGGATCATGGTATGAATGATCTAGTCGAGCTTAGATTGAGTTCCATTTCACAACTTAAGTGTCTCATTGACACTAAGCATGATAATTCTCAAGTAACAACTGTCTTCTCCAAGTTAGTTGTACTAGAATTGGAAGAAATGGAAAGTTTGAGAGAATTGTGCAACGGTCCCCTTTCCTTTGATTCTCTAAAGAGTTTAGAGAAGCTGACCATCAAGGGATGCAATCAATTGCAAAGCTTATTCACGTGCAGCCTAAACCTCTTCAATTTAAAGAGCTTGTCATTGATACAATGTCCGATGTTGATCTTCTCCCTATTTCAACTGACCACGTCTCATAGCCTAGTGTCATTAGAAGAATTGGAAATAATTGGCTGCAGGCATCTTGAATACATAATAATAGATGAACGAAAAGAGAAGGAATCGAGAGGAGAAAAAGTTGTTGATGATGAGGATAATGATCGCAAGAGGAGTCAAGACTCAATATTTCCAAAACTTAAGAAACTTAATATTCATGAGTGTGATGGATTAAAATTTATATTCCCATTTCTCTCTATTCAGGATCTTCCGGAATTAGAATCTTTCCAGGTATTTGGTTGTGAGATGCTGCAATGCATATTTGGCCACAATTTAATAAATAATTATCTAAAATGTGATGTTACCACGTCTTCTCCCATTTCTAGAAACGCTTCCAAACCAGAACAACAATCAGATCCTATGAAATGCAGTCCCTTTTCATGGACCAATATAAGTTGCTTTGGTAAAAAGTACTTGCCCAAATCAATGACTAATGCAAGGACTGAAATCCCATTGGTTTCTGAAGATCAACAGCAGCACATAGTAGGAGACACGGGAGATCATCACAGTGGTGGCAATAAGTGGCACAATGTCTTCCCAAAATTAAAAGAAGTCATGGTTTACAGTTGCATGAAATTAGAATACATATTTGGACACTATTCTGATGCTCATCAAAACCATAATGAGATTCACCTTCAGCTTCCAGCATTGCAACATCTCTTTCTTATGGATCTGCCAGGTTTAGTCGCCATGAATCCTCAACATTATCACACAACATTTCCACTTTTGAAAGATCTTAATGTTAGTAACTGCTTGCAATTTGCTATTGGTGATCTCACAATTCATTCGGTTTCACAATCTTTGGATTCTACAATGAAGAAGGATCTACCTTCAAAGATTACGAGCCTTTTGGTTGGTCCCAAAAATTCATTTTCCCTCAATTACCTTACATTGATAAATATCAGGCAATGTGAAAAATTGGAAATTGTGTTTTCAACTTCTATATTAAGATGCCTACCAGAATTGATTATTCTAAAGATAGAAGAATGCAAAGAGTTGAAGCATATTATTGAAGATGATTTGGAAAATGAAAAATCCATAACTTTTGAGTCTACAAACACATACTTCCCAAAGCTAGAAATACTTGTTGTGGTAAGCTGCAACAAAGTCAAATGTGTCTTTCAGACCTCCATATATACAGAGCTTCCAAAGCTAAAAGTTCTGATAATAACAGAAGCATGTGAGCTGCGAGAAATATTCAAAACTGAAGGCGGTGATCAGAAACTCAAGATTCCAAATCTGGAAGTTGTAGAATTTATCAATCTTCCAAACCTCTACTACGCTCAGGGAACACACTTTCAGGATGTAAAATATTGTTTTGTACAAGACTGTCATAAACTTGCTCTGACTTCAGCATCAATATCCGTAGACATTGATGACATTTATGAAAATATTAGTTTTGTTGACGCCATAGATAGTAGATTATATGGCGAATTAGAGATTCTACTGGATCCATTAATAAGCCATTTCACCTGTAATGAATATCCAAGTTCAGAATCAGAATCAGGAAGTACTTCATCACAGCCACAGTTGGATGGTTCTACTACACCAGAAAAAACTTTAGCAACAAATTCGTCTACCATTTCAGAAACAAAGAAGGAGCCACCAATACAATTATCTGATCGTAAACAAAAGGGTGTCGAGATAAGTGATGAAGAAGGAATTACATCAACTAACGTTAAGTCTTTAACATCCTCAACTCATTCAAAAACAAATAGTTCATCATCAGATCCATTAATTACTTCTGAATTAAAACCATCTCCACAGAAAGACGGTGATTGCCAAATAGCCACAACCTCTTTGTCCATTGGCACGACGGAGACCAATGATGAAGGTGACCCTTCTCAAAAAGTAGAGGAGTTAAGTTCTTCTTTGCCTATCACAAAGGAGCTTGAGCAACTAGTCTCGAAGAAGCATCTGGATTATGAGAATTTGTCTTTGTTGACAGATTTCCTTGTTAAGCATTCTTCAATTCTTTTAAGGGATGCTTCACTAAGTAGCAGATACAAGGGTTATGCTTACAACTGTCTAGCAGAGCTATTGAAATTCCTCCAAACTCATAGTGTGTTGGATGTGTTAGGTTCAAAACACTCTGAGTTTGTTGAGTTATTACAAGATGTGCGCAAATTCGGTTTTGACAAGGAATGGTTGGATGGTGTTGAAAGGCGTGTTTTGTTTCCTGATAATAAAGTCTCTCAAGATACATTACAAAAGTCATTAGATTCCAAGCAACAAGCGGTCGCCAAGGAGGTTGAAGTGTTGCGTTTAAAGATAGCTATTTTAAGTCAATGTACGGAAGATCTTAAGCATCAGTTGACATCGTCTGAAGCTGTTTTGGAGAGTATCATTCAACAGAAGACAGTATTAAGCGCTCCTATTGGCTATTAG 4947 0.3586 MTSFLIDYAKKNVEKSLDGVLKELRYICCFTCIAKEFEEEKTWLEAERTTVGQRVKVAKRRGDDVQDNVIFWEEEADKIFQEDTKINKKCFFGLCPDCIWRYRKGKELANKKDQIKKLMKTGKELEIGLPAPLPDVDRYSSRHYISFKSRESKCKELLDALKDDNNYIVGLQGMGGTGKTTLAKEVGKKLKQSKQFTYIIDTTVSFSPNIKKIQDDIAGPLGLTFDGCSESDRSKKLWKGLTSGEKILLILDDVWGDIDFEEIGIPYSDNHNGCRILVTTRNVLVCNKLECSKTIRLEFLSQDDAWEMFKRHASLTEISTKSLLDKGFKIANECQGLPIAIAVIASSLKGKHQVEWDVALKSLKKHAPIHEIDDDLVKIYECLKFSYDNMNDGKSKRLFLLCSVFPEDEEIPTERLMRLGIGAGLFGENYRNYEDARSQVVISKKKLLDSCLLLEVDQDRVKMHDLVRDAAQWIAKKEIQTIKLYDKKQKAMVEREKNIKYLFCKGKLKEVLSCKLDSSKLQILIVSMDMDVDYRNHEKFEVPNSFFENISGLRVFHLLINYFDPVTISLPQSFQSLKNIRSLLFQNVDLGDISILENLQSLETFELELCTINELPEGLAKLQNLILLKLLGCIIIENNPFKVIEGCSSLEELYFVGSFNDYCREISLPMLQRFILDDGWRIVNDSVSKCVSLLHHENKYILSKKQLKEYIQVVEAIGLRGIWGEWVNIIPEIVPMDHGMNDLVELRLSSISQLKCLIDTKHDNSQVTTVFSKLVVLELEEMESLRELCNGPLSFDSLKSLEKLTIKGCNQLQSLFTCSLNLFNLKSLSLIQCPMLIFSLFQLTTSHSLVSLEELEIIGCRHLEYIIIDERKEKESRGEKVVDDEDNDRKRSQDSIFPKLKKLNIHECDGLKFIFPFLSIQDLPELESFQVFGCEMLQCIFGHNLINNYLKCDVTTSSPISRNASKPEQQSDPMKCSPFSWTNISCFGKKYLPKSMTNARTEIPLVSEDQQQHIVGDTGDHHSGGNKWHNVFPKLKEVMVYSCMKLEYIFGHYSDAHQNHNEIHLQLPALQHLFLMDLPGLVAMNPQHYHTTFPLLKDLNVSNCLQFAIGDLTIHSVSQSLDSTMKKDLPSKITSLLVGPKNSFSLNYLTLINIRQCEKLEIVFSTSILRCLPELIILKIEECKELKHIIEDDLENEKSITFESTNTYFPKLEILVVVSCNKVKCVFQTSIYTELPKLKVLIITEACELREIFKTEGGDQKLKIPNLEVVEFINLPNLYYAQGTHFQDVKYCFVQDCHKLALTSASISVDIDDIYENISFVDAIDSRLYGELEILLDPLISHFTCNEYPSSESESGSTSSQPQLDGSTTPEKTLATNSSTISETKKEPPIQLSDRKQKGVEISDEEGITSTNVKSLTSSTHSKTNSSSSDPLITSELKPSPQKDGDCQIATTSLSIGTTETNDEGDPSQKVEELSSSLPITKELEQLVSKKHLDYENLSLLTDFLVKHSSILLRDASLSSRYKGYAYNCLAELLKFLQTHSVLDVLGSKHSEFVELLQDVRKFGFDKEWLDGVERRVLFPDNKVSQDTLQKSLDSKQQAVAKEVEVLRLKIAILSQCTEDLKHQLTSSEAVLESIIQQKTVLSAPIGY 1648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1508g00001 1648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 402 IPR027417 -
Vivi1508g00001 1648 MobiDBLite consensus disorder prediction 1347 1387 - -
Vivi1508g00001 1648 SUPERFAMILY L domain-like 462 1190 - -
Vivi1508g00001 1648 PRINTS Disease resistance protein signature 241 255 - -
Vivi1508g00001 1648 PRINTS Disease resistance protein signature 168 183 - -
Vivi1508g00001 1648 PRINTS Disease resistance protein signature 334 348 - -
Vivi1508g00001 1648 PRINTS Disease resistance protein signature 796 812 - -
Vivi1508g00001 1648 Pfam NB-ARC domain 154 389 IPR002182 GO:0043531
Vivi1508g00001 1648 Gene3D - 135 296 IPR027417 -
Vivi1508g00001 1648 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 1225 - -
Vivi1508g00001 1648 MobiDBLite consensus disorder prediction 1404 1436 - -
Vivi1508g00001 1648 Gene3D - 299 391 IPR042197 -
Vivi1508g00001 1648 MobiDBLite consensus disorder prediction 1388 1403 - -
Vivi1508g00001 1648 Gene3D Ribonuclease Inhibitor 741 956 IPR032675 -
Vivi1508g00001 1648 Gene3D Ribonuclease Inhibitor 457 712 IPR032675 -
Vivi1508g00001 1648 Gene3D Ribonuclease Inhibitor 1119 1266 IPR032675 -
Vivi1508g00001 1648 SUPERFAMILY RNI-like 1139 1272 - -
Vivi1508g00001 1648 MobiDBLite consensus disorder prediction 1347 1446 - -
Vivi1508g00001 1648 FunFam Probable disease resistance protein At1g61300 135 294 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1508g00001 169 857 WRKY Transcription Factor Family AT5G45050 24.566 1.87e-19 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1508g00001 - - vvo:131642047 3211.78