Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1502g00001 ATGTCAAGACCTCCCATTTTTGTTAATGACTTGGAAATAGGATGCCAGGTTTGGAAAATGGGTATCCGAGTCATTGATTTGTGGACTGTGAAAGAGAGGAATGGCAAGTTACATGTGGAGCTAATCATACAAGATGCAAAGGGTCAACAGATTCAGGTTGTTACACGTCCGAGAGAATACAACCATTGGATGCAAGTGTTGACCGAACATGATACATATACACTGTATAACGGTGAACCTCTAAAAAATGATATCCAATTGAAGGCATGTGATAACCCAATTAAACTCATGTTCAACCAAGCAACCACGCTTTATAAAAATCCGCAGCACAACATCCCTCCTCACAAATTTGATTTCAAGCCTATACCTGATTTTATTTCTGGAATTTTCAAGCATGATATGTTGTATGATGTCATCGGAATCTTCAATGAAGTGATTCGGAAACAAACTGCCGGCAACTGCAAAAAGGCTTGTGCTAACATTTTATTTAGTGACTACCACGGTAATGTAATTGAAGTTGTTCTCTGGGATTCATTTGCTTCAAAGCTATTTGACTTCCTAAACTCAAATTCAAATGCCACTCCTATCATTATTGTGCTAACCCATGGTTGGTGCAAAAGAAGTGCTGCAAAATCCACTTTGTCTAATGCATGGAATGGAAGTAAACTTCTCATCAACTATGATCATCCACAAGTGCACGATTACAGAACTAAGTTAGGCGATTATAAACCATGCCCACTGGCTTCTCAAAGTGTGTCGCAAACATCTGAATATGATAAGTTTTGGACCAACTCTTTGGAATTCAAGAGCATATCTGAGATTAAAGGAAAAAATTAG 837 0.3823 MSRPPIFVNDLEIGCQVWKMGIRVIDLWTVKERNGKLHVELIIQDAKGQQIQVVTRPREYNHWMQVLTEHDTYTLYNGEPLKNDIQLKACDNPIKLMFNQATTLYKNPQHNIPPHKFDFKPIPDFISGIFKHDMLYDVIGIFNEVIRKQTAGNCKKACANILFSDYHGNVIEVVLWDSFASKLFDFLNSNSNATPIIIVLTHGWCKRSAAKSTLSNAWNGSKLLINYDHPQVHDYRTKLGDYKPCPLASQSVSQTSEYDKFWTNSLEFKSISEIKGKN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1502g00001 278 CDD RPA1_DBD_A_like 19 103 - -
Vivi1502g00001 278 SUPERFAMILY Nucleic acid-binding proteins 7 109 IPR012340 -
Vivi1502g00001 278 CDD RPA1_DBD_B_like 137 237 - -
Vivi1502g00001 278 Gene3D - 110 243 IPR012340 -
Vivi1502g00001 278 Gene3D - 5 107 IPR012340 -
Vivi1502g00001 278 SUPERFAMILY Nucleic acid-binding proteins 117 237 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1502g00001 111 275 Core DNA Replication Machinery Family AT2G06510 26.437 8.20e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1502g00001 - - vvo:131642022 584.719