Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1495g00003 ATGGGAAAAGTGCTGGCCGTTTTGGAGCTTACATCGGTCCACTTTTTACCCGATGGGAAAAGACCCATTTCCACTAAAACCCTAATGACTAAAACTCAGACATTTCATTTTATTCCTTCTTCTGCCCTCGTTCCTAATATTCCTCTCTTCCTCTTTTCTTCCGCCCGCAACCCAGCCGTTCGTCGCCGCCCTCGTTCGCCGCCGCCCTCGTTCGGCCGCCGCCCTCGTTCGGCCGCCGTCCTCGTGTCTTTCGCTCGATTCGTTCGCCGCCGTCCTCGTGTCTTTCGCCGCCTCCTTTATTCGCGAATTCGCCGGCAGCCGTCGGAGGACCGACCTTCATTCGCTGCCTTCATTCTGGTACACTTCTTCTTCCCTGATTCTAAGTTATTGGCAGAATCAGTTGATAAAACTGTGATACGACTTTTATGTTTTGTTGTTGTTTTGGATTCTGGAAAGAAATATGTGTTTCTTGTTTCTTGTTTCTTGTTGCTTGTCAACGCCTCATATCCTTACGTGCTTGCTTATATATACATCATTCACCATAAAATACATTTCAATATTCAATTCCTCTTAAACTCTTCTATCAAACTTGAACAAATTTCCGAATTTTTCAGCATCTATATCGCACAAGCACAACGCCGCAACCGTAGCAGAAGATGTTGTTGCTGCCTGTTCAGCTTAATTTGGAAGCTCCTCGTAGCAATAGTTTTCATCGTTGCTCTTATATTCCTTGTTTTGTTCCTTATCATCCAACCACAATCCTTCAAATTCAGTGTCAAAGAAGCCAAACTCACTCAATTCAACTACCCCACCAACACCAACACCCTCCACTACAACCTCGTACTCAACTTCACGGCACGTAACCCAAACAAAAAACTCAACATCTACTACGATGCAATTGAAGGACATGTATCCTACAAAAGAACCAGGTTTGCATCAACGGATGTAATAACATGGTTAAATTCTTTCCGTCAATACACGAAAAGCTCGAGCCCTATGAGTGGTGTTTTTTCTGGGCAACGTGTGATGGTTTTTGACCATGATCAGGTTTCTGATTTTCAACGTGATAAGAACGATGGAGTTTTTCATTTTGATGTGAAATTATACTTTACGATGAGGTTTAGGCTTGGGAATTTTATTTTTCCAGATATTAAGGTTCCAGATATTGATGTTCCTTTTGCTTCTAATGGGACTAAGCTCATGAATTCATTTGAACCCACCACATGTGAAGTTAATTTTTAA 1242 0.4259 MGKVLAVLELTSVHFLPDGKRPISTKTLMTKTQTFHFIPSSALVPNIPLFLFSSARNPAVRRRPRSPPPSFGRRPRSAAVLVSFARFVRRRPRVFRRLLYSRIRRQPSEDRPSFAAFILVHFFFPDSKLLAESVDKTVIRLLCFVVVLDSGKKYVFLVSCFLLLVNASYPYVLAYIYIIHHKIHFNIQFLLNSSIKLEQISEFFSIYIAQAQRRNRSRRCCCCLFSLIWKLLVAIVFIVALIFLVLFLIIQPQSFKFSVKEAKLTQFNYPTNTNTLHYNLVLNFTARNPNKKLNIYYDAIEGHVSYKRTRFASTDVITWLNSFRQYTKSSSPMSGVFSGQRVMVFDHDQVSDFQRDKNDGVFHFDVKLYFTMRFRLGNFIFPDIKVPDIDVPFASNGTKLMNSFEPTTCEVNF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1495g00003 413 PANTHER OS05G0367900 PROTEIN 218 380 IPR044839 GO:0098542
Vivi1495g00003 413 Pfam Late embryogenesis abundant protein 284 386 IPR004864 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1495g00003 249 373 SNARE and Associated Proteins AT1G32270 30.159 1.85e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1495g00003 - - vvo:131641987 734.176