Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1473g00001 ATGAGAGAAGAAAGCTGGACCAGAGTTGTTGAGAACCCAGTGAAGCTGAGAAACAATGTCCTTCATATTCCGAGAGCAGTTATCCGTGCATGCATACACGGTAAGATCCCAAGGATTAAGCTTATCGATCGCGACAACAATGTTCCTTATTATTGTGAGATGACAAAGAGGGAAGACACTGTAGACCGGTATATCTTTGGTGGATGGACTGACTTCTGCAAAGACCGCAACCTTCAGAAAGGTGACACCCTACGTTTCAGTATCAGATATCCTCCGGTGGAAGAGATCTCTGTGGCGGTCCGACGTGGAAAAGCTTAG 318 0.4623 MREESWTRVVENPVKLRNNVLHIPRAVIRACIHGKIPRIKLIDRDNNVPYYCEMTKREDTVDRYIFGGWTDFCKDRNLQKGDTLRFSIRYPPVEEISVAVRRGKA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1473g00001 105 CDD B3_DNA 21 86 IPR003340 GO:0003677
Vivi1473g00001 105 SUPERFAMILY DNA-binding pseudobarrel domain 17 88 IPR015300 -
Vivi1473g00001 105 ProSiteProfiles B3 DNA-binding domain profile. 6 104 IPR003340 GO:0003677
Vivi1473g00001 105 SMART B3_2 13 104 IPR003340 GO:0003677
Vivi1473g00001 105 Pfam B3 DNA binding domain 14 88 IPR003340 GO:0003677
Vivi1473g00001 105 Gene3D - 2 102 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi1473g00001 B3 3.3e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1473g00001 K03526 - vvo:131637169 179.874