Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi146g00024 ATGGTATATTTGGGCAGTTTTGATTTCAATAGGTTGAGTGACTTTGTTTTCAAAGAACCAAGGAAAAAGGTATACATCTGCCCGGAGGAGACTTGCGTCCACCACGACGCGGCTAGGGCGCTCGGCGATCTCACTGGAATAAAGAAACATTTTAGCAGAAAACATGGAGAGAAGAAATGGAAGTGTGAGAAATGTTCCAAGAAATATGCAGTTCAATCTGATTGGAAAGCTCATGCCAAAACTTGTGGTACTAGAGAATATAAGTGTGACTGTGGTACCCTCTTCTCTAGGAAGGATAGTTTTATTACACATAGAGCTTTCTGTGATGCTTTAGCAGAAGAGAGTGCAAGACATACCTCACCACTCACTCCAACAACTCTAAATTTCAATAATGAAGAGTCAAATTTGATGAACACACAAACTAGTTTGTCACATGGATTCATATCACGTCAAAATCTAGCTGGTTTTCCACATGAAGGGTTTCATGATCAGCAAAAGCCAAGTTTATCACTATGGTTAAACCATGAAAATCAACAGAATATTAATCATCAACCATATAATTCAGTTGATAATGTTTCATCTGTTTTTTGTGATATCATGCAAATGGCACAAACTAGTACTACTCCAATGTCAGCTACTGCACTTCTTCAGAAAGCAGCTCAAATAGGTTCAACAAGAAGCAGTACTACTAATAATAATCCATCTATTTTCAGTGGAAGACAACTTGACGAGACAAGCTATGCGAATTTGCAATGA 756 0.381 MVYLGSFDFNRLSDFVFKEPRKKVYICPEETCVHHDAARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARHTSPLTPTTLNFNNEESNLMNTQTSLSHGFISRQNLAGFPHEGFHDQQKPSLSLWLNHENQQNINHQPYNSVDNVSSVFCDIMQMAQTSTTPMSATALLQKAAQIGSTRSSTTNNNPSIFSGRQLDETSYANLQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi146g00024 251 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 232 IPR031140 -
Vivi146g00024 251 FunFam protein indeterminate-domain 5, chloroplastic-like 38 117 - -
Vivi146g00024 251 Gene3D Classic Zinc Finger 19 108 - -
Vivi146g00024 251 SUPERFAMILY beta-beta-alpha zinc fingers 55 104 IPR036236 -
Vivi146g00024 251 MobiDBLite consensus disorder prediction 223 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi146g00024 21 150 IDZ Gene Family AT5G03150 79.412 6.06e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi146g00024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi146g00024 K25870 - vvo:131625332 512.686