Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi146g00018 ATGAAGTTACCTTTTGAGGAATTTCAAGTGAAGGGAGTGTTGGATTATTTCTCTTCAACTTCAAATTCAACTTCAACTTCTTCAACAGCTTCAGATTCATTTTCATTGCTTTTGAATCAACAACAACAGCAACATCAGAATTGGACAACGTTGGACAAACAAGATTATTGCTATGTGGAGCCTACTTCTGTTCTTGATTCACGAAGAAGCCCTAGTCCTCCAATTTCATCTTCAACAATGTCATCTTCTCTTGGTAGTGGTTCAAACAACAACAACAACAACAACAACAACACTTCGATGGTAGTTTCGGAGAATCTCGCTCGTCTTTCAAACTCGAACTCGAATGAAGAAGGGTTCGAGAACAGCGAAGAGAAATGTAGTGGTGGTGGTGGTGGTGGTATGAGAATGGAGGATTGGGAGGGGCAAGATCAGTCTCTTTTGAGGTTAATCATGGGAGATGTTGAAGACCCTTCTGCTGGTTTGAACAAAATCCTGCAAAACAGTGGTTGTGGTTCTGGAAATGCTGATTTTCATGGCGGTTTCGGTGTTTTGGAACATCATCATCAACAACAACAAGGTTTGAACATGGACCCTTCTGTTGGGAATTATAATGTTTTTCCTTTCAATGCTGAAAATTTGGATGGTCACAATGTGAAACCTGGTCATGAATCTATGTTTGGTAACTATCCTATGTTGACATCATCGTCGACAACTTCCGGTGTGTTTTGTTCTCAGCAACAGCAACAACAAGGGTTCGGTGTTGTAGACGAGAAGCCTCAAGTTATTAACCCTAATTTTATGATGAATCACAATCAAGTTCAATTTGCTGATAATCCGTCTTTCTTTGTTCCATTGCCGTATCCTCAAGTGCAAGAGCAACAAGTTTTTTCTTCTCAGAATCAGTTGAAACGGCCACTTTTCGATGCGGTTGGTCACAATTATCCGGTACCGAGGTTACCGCTTCTGGATTCTGGTCAAGAAATGTTTGCTCGGAGGCATCAGCAGCAGCATCAGCAAACACAGCTTCCATTGTTTCCCAATCATCATCTGCAGCAGCATCAGCAATCGCCGGTTGTGCCCTTTGCGAAGCAGCAGAAGATGAGTTCTACTACTACCACCGGAGACGATGCAAGCAATCAGGTTCAGCAGAGTATATTCGATCAACTATACAAAACTGCCGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTCATAGGGCTGCTTTTTACACTAAGGAAGCTTTACAACTAATGCTTCATTCAAACAGTAACAACAATCTCAATGCTTTTTCGCCGATTAATTTCATATTCAAAATCGGTGCTTACAAGTCTTTCTCCGAGATATCGCCTGTTCTTCAGTTTGCCAACTTTACTTGTAATCAAGCCCTCATTGAAGCCTTGGAAAGGTTCGATCGAATTCATGTTATCGATTTCGATATCGGGTTTGGAGTACAATGGTCTTCTTTTATGCAAGAGCTTGTGTTAAGAGGTAACGGTACACCTTCACTTAAGATTACTGCTGTTGTATCGCCCTTGTCGTGCAATGAGATTGAGCTCAATTTCACCCGAGAGAACTTGAGTCAGTACGCCAAAGACCTCAACATGCCGTTTGAGTTCAACGCTTTGCACATCGAATCGTTAAGCTCTCCGTCATTTCCTCTACCGGGTCATTTATTCGATAGCAACGAGGCCGTTGGTGTGAACTTTCCTGTTTTGAGTTTCATAAACCATCCATCATGTTTCCCTCTGGCCCTCCACTTTCTCAAGCAGCTGAGGCCAAAAGTTATCGTCACACTGGATAAAAACTCCGACCGAATCGACGCACCTCTTCCAACCAACACTGTTCACGTTCTTCAATCTTACTCGTCCTTGCTCGAATCACTAGACGCTGTTAACGTGAACCTCGACGTACTCCAAAAGATCGAGCGTCATTTCATCCAACCAACCATCAACAAAATTGTCCTCGGCCACAACAACCGCTCCCCCGACAAACTACCTCCATGGAGGAACATGTTTCTTCAATCCGGCTTCTCTCCGTTCACATTCAGCAACTTCACGGAAGCGCAAGCCGAATGTTTGGTTCAACGGGCACCGGTGCGAGGGTTTCAAGTGGAAAGAAAGCCTTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAATTTCAACTTGGAGATGCTAA 2241 0.4355 MKLPFEEFQVKGVLDYFSSTSNSTSTSSTASDSFSLLLNQQQQQHQNWTTLDKQDYCYVEPTSVLDSRRSPSPPISSSTMSSSLGSGSNNNNNNNNNTSMVVSENLARLSNSNSNEEGFENSEEKCSGGGGGGMRMEDWEGQDQSLLRLIMGDVEDPSAGLNKILQNSGCGSGNADFHGGFGVLEHHHQQQQGLNMDPSVGNYNVFPFNAENLDGHNVKPGHESMFGNYPMLTSSSTTSGVFCSQQQQQQGFGVVDEKPQVINPNFMMNHNQVQFADNPSFFVPLPYPQVQEQQVFSSQNQLKRPLFDAVGHNYPVPRLPLLDSGQEMFARRHQQQHQQTQLPLFPNHHLQQHQQSPVVPFAKQQKMSSTTTTGDDASNQVQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFHRAAFYTKEALQLMLHSNSNNNLNAFSPINFIFKIGAYKSFSEISPVLQFANFTCNQALIEALERFDRIHVIDFDIGFGVQWSSFMQELVLRGNGTPSLKITAVVSPLSCNEIELNFTRENLSQYAKDLNMPFEFNALHIESLSSPSFPLPGHLFDSNEAVGVNFPVLSFINHPSCFPLALHFLKQLRPKVIVTLDKNSDRIDAPLPTNTVHVLQSYSSLLESLDAVNVNLDVLQKIERHFIQPTINKIVLGHNNRSPDKLPPWRNMFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISISTWRC 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi146g00018 746 ProSiteProfiles GRAS family profile. 376 745 IPR005202 -
Vivi146g00018 746 MobiDBLite consensus disorder prediction 63 132 - -
Vivi146g00018 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 351 740 IPR005202 -
Vivi146g00018 746 Pfam GRAS domain family 387 745 IPR005202 -
Vivi146g00018 746 MobiDBLite consensus disorder prediction 65 117 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi146g00018 385 746 GRAS Transcription Factor Family AT4G00150 54.670 6.18e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi146g00018 GRAS 8.9e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi146g00018 - - psat:127101146 1268.83