Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1443g00007 ATGGAGTTTCTTCCACCTGGTGTTGGGTTCTTTCCTTCCGACGAGCTAACTGTTGGCTACTTCCTTGCCAACAAGAACAACCCTGAGCTTCAGGCTTTCAATGGCTGTCAAATGATTCCAGAGCTGAACGTATATCGGTACGACCCGTACGAAATGCTTTTAGCTCCGTCTTTTTCCTTAGAGCATCGGAGCCATTTTTATTGCTTTGCTCCAAAAGTTGAGGACGAAATAACTGTCAGGCACTGCGTGAGTGGCTTTTGGAAGAAAATAGGAAATGTTCGAGACATTAGGGTCGGAGCTGATAATGTTGCTTTGGGGAAGAAGTCCCTTTTTGTTTTCTTTTTTGGGAATTCTGTTCATAAGGCTGTCAAAACTAATTGGATTATGTATGAATATGCCTTGGCGGACACTCCTCGGGCTCCTTTTGTTGTCTGCCGCATTTTTGAACGCCCACAAGGAATGGATCTGGAGGCCGAGTTCGGGCCATTTAATGAAGTTGATGTCATGATGAATGACGTCAATCCGAATTCTGAGAGGGATGCTGCTGCTTCGAGGATGAATGAAGGGGGCGATGCTGCTGGGCCCAGCAACCAGAATGAGAAGTGTGTTACTCTTATCATCAACATTACATTGTACCTGGCTGATGCGACTACAGTACAACTCGATCGTGCTATAATTGATGGAGATTTTCTTGAGTTGGCTGATCTTTATTAG 714 0.4496 MEFLPPGVGFFPSDELTVGYFLANKNNPELQAFNGCQMIPELNVYRYDPYEMLLAPSFSLEHRSHFYCFAPKVEDEITVRHCVSGFWKKIGNVRDIRVGADNVALGKKSLFVFFFGNSVHKAVKTNWIMYEYALADTPRAPFVVCRIFERPQGMDLEAEFGPFNEVDVMMNDVNPNSERDAAASRMNEGGDAAGPSNQNEKCVTLIINITLYLADATTVQLDRAIIDGDFLELADLY 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1443g00007 237 ProSiteProfiles NAC domain profile. 4 150 IPR003441 GO:0003677|GO:0006355
Vivi1443g00007 237 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Vivi1443g00007 237 PANTHER NAC TRANSCRIPTION FACTOR 56 4 164 - -
Vivi1443g00007 237 Gene3D NAC domain 13 154 IPR036093 GO:0003677|GO:0006355
Vivi1443g00007 237 SUPERFAMILY NAC domain 3 149 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1443g00007 4 172 NAC Transcription Factor Family AT1G69490 31.522 7.12e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1443g00007 NAM 2.1e-14 No_clan