Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1440g00008 ATGGAAGAAGACACAGATTCACGAAAGCAAGCTAGGCTAGCCATTTTGGAACTAGCCAACATGATAAGCGTCCCTATGTCCTTAAACGCCGTCGTACGTCTCAACGTTGCCGATGCAATCTGGGAAGGTGGTTCCAACGCGCCTCTCACTGCCGCTCAGATCCTCGCGCGTGTAATTCCAAACGGTGGCGGTGACGCCGAGAATCTCCAGCGCGTGCTACGCATGCTCGCTAGTTATGGTGTGTTTGAAGAGGTTATTGCTGGCGGTGAAAGGAAGTACTCGCTGACGGACGTTGGGAAAACTCTTGTCACCGATGAAGAAGGTTTGTCGTATGGCGCTTACGTGCTCCAACATCACCAGGATGCGTTGATGAGAGCATGGCCATTGGTACATGAAGCAGTTGTGGACCCATCAAAGGAGCCATTTGAGAGGGCAAATGGAGAAGGAGCATATGATTATTACCTAAAGAAACCAGAGATGAATGAGTTAATGTTGAAGGCTATGTCAGGGGTATCAGTGCCTTTCATGAAGGCTCTTTTGGGGAGTTACCATGGGTTTCAAAATGTGGAGAAGCTGGTTGATGTTGGTGGCAGTGGTGGTGATTGTCTTAGAATGATCTTGCAGAAATATCCTAATATTAAAAAAGGGTTGAACTTTGATCTTCCTGAAGTTGTGGCCAAAGCACCACAGATTCCAGGTGTAACTCATGTGGGTGGTGACATGTTCCAGTACATTCCACAAGCAGATGCTATCTTTATGAAGTGGGTGCTAACAACATGGACAGACAAAGAGGTCAAACACATAATGTCAAACTGTTACAAGGCACTCCCAGCAGGAGGAAAACTAATTGCTTGTGAGCCAGTGTTGCCGGAGGATTCAGATGATAGCCACAGAACAAGGGCATTGCTTGAGGGTGACATTTTTGTGATGACAATTTACAGAGCCAAAGGAAAGCATAGGACTGAAGAACAGTTTAAGCGGCTTGCAATTTCAGCAGGATCTTTCACACAAGTTAGATCTTTCAAAAACAAATCCAAATAA 1041 0.4601 MEEDTDSRKQARLAILELANMISVPMSLNAVVRLNVADAIWEGGSNAPLTAAQILARVIPNGGGDAENLQRVLRMLASYGVFEEVIAGGERKYSLTDVGKTLVTDEEGLSYGAYVLQHHQDALMRAWPLVHEAVVDPSKEPFERANGEGAYDYYLKKPEMNELMLKAMSGVSVPFMKALLGSYHGFQNVEKLVDVGGSGGDCLRMILQKYPNIKKGLNFDLPEVVAKAPQIPGVTHVGGDMFQYIPQADAIFMKWVLTTWTDKEVKHIMSNCYKALPAGGKLIACEPVLPEDSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKRLAISAGSFTQVRSFKNKSK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1440g00008 346 PANTHER O-METHYLTRANSFERASE 18 333 IPR016461 GO:0008168
Vivi1440g00008 346 PIRSF O-mtase 1 345 IPR016461 GO:0008168
Vivi1440g00008 346 Pfam O-methyltransferase domain 131 333 IPR001077 GO:0008171
Vivi1440g00008 346 Gene3D - 1 106 IPR036388 -
Vivi1440g00008 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 346 IPR016461 GO:0008168
Vivi1440g00008 346 SUPERFAMILY "Winged helix" DNA-binding domain 7 105 IPR036390 -
Vivi1440g00008 346 Gene3D Vaccinia Virus protein VP39 107 344 IPR029063 -
Vivi1440g00008 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 341 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1440g00008 3 341 Monolignol Biosynthesis Gene Families AT3G53140 73.547 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1440g00008 - - gmx:100784957 573.548