Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi143g00038 ATGGAGCCAATTTCGGAAAAACGATATCCTCTAGGTGCAGTAAATTACAAGTTATATGAAGAGGTTGGGGAAGGCGTCAGTGCCTCAGTATTCCGAGCTCTCTGCATTCCACTCAATGAGATTGTTGCCATCAAAGTACTTGATCTTGAGAAGTGCAATAATGATTTGGATGGAATTCGGAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATCTTTTAAAAGCATATTGCTCTTTTACTGCTGGGCACAGTCTTTGGGTTGTGATGCCCTACATGGCTGGTGGCTCTTGCCTTCATATAATGAAATCGGCCTTTCCCGAGGGTTTTGAAGAACCTGTTATTGCAACTGTATTGCGTGAGGTTCTCAAAGCTCTTGTTTATCTCCATGCCCATGGGCACATACACAGAGATATTAAGGCTGGGAATATTTTGTTTGATTCTAATGGTGCAGTCAAAGTGGCTGACTTTGGAGTATCTGCGTGTATGTTTGATACCGGAGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGATTTTAAAGCAGATATATGGTCGTTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCACCATTTTCCAAGTATCCACCGATGAAAGTTTTGCTTATGACTTTGCAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTCAAAGACCCAAAGAAGCGTCCAAGCTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTGCCACCGAATATCTTGCTCGCACCATTCTCGATGGCCTTGCTCCATTAGGAGACCGCTTTAAAACGCTGAAGGCTAAAGAGGCAGATTTATTGATGCAGAACAAAGCTCTTTATGAAATGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACCTGGAAGATTTGAAGAGTCAAGCTGCTCTTATTCAAGATGAAGACATGTCAATTGCAGAAAAGCCAGATACAGATAAGAAGAAAAAAGACATCTTAAATGACTTAAAGGTTCCCGCGGAGGAGCATTCTGCTTCTAATCATTCAGAGGGTAAATCCACACTGGACAAGGAGGATGGATTCAACAATCTTAAGGATTTGGAAAGTTCACTTGCTTCATTCCCTGTTAAACCTCTTCAAGCACTCAAAGGTTGTTTTGATGTCTGTGATGATGATGATGTCAATAATACTAGTCCAAGAGATTTGGATCACAGTTATGGAAGAATTGATAATGAAAGTTCTGGGCCAAGTAAAATGTCGCCTCAAAATTCTACTCAGCCTAAGAAATTTTTCTCTAGCTCTTTACAACCTGATAATTTTTCCAAAAAAGTTACTGATGTGGACAGGGATTATCCACAAACAAAATATCCTTCCGAACGGAATCACAGTGGTCCATTGTTATATCGGCAGAGGAGAGATATCAACAACTTTCCATCTGTTGATGACGCATCAGAAGGAGCGGTCGTCCAGCGTAGGGGACGGTTTAAGGTCACCTCAGCAGATCCCAGTTCAATGGGTCTTTCAAATAACTCTTCTGGCCCTGTTACTGGAAGTCCTACTCCTACTCCTACCAGTCCCCCAAAACAGAACTTAGTGACCGCTTCTATTCTTCCATCCCTGCAGTGCATCTTGCAACAGAACGGCTTGCAGAGGGAAGAAATTATTAAACTGATAAAGCACACAGAGCAATCTTATGGTAAGAATTCAGAATCCATAGAGGCAGGAGCAGTTGATATTCTGCAGGCATCACCCGCGACAACTAGAGAAAAAGAGCTGCATTCGCAGGTGATTCAACTTCAGCAGAGCATTGGAAGCCTTGTTGAGGAATTGCAGAGACAAAAGATGAAAAATGTTCAGTTAGAGAGACAGTTAAGCAGTATGGTCAACAAAATTGAAAAGTGA 2016 0.4157 MEPISEKRYPLGAVNYKLYEEVGEGVSASVFRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLKAYCSFTAGHSLWVVMPYMAGGSCLHIMKSAFPEGFEEPVIATVLREVLKALVYLHAHGHIHRDIKAGNILFDSNGAVKVADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARATEYLARTILDGLAPLGDRFKTLKAKEADLLMQNKALYEMEQLSQKEYIRGISAWNFNLEDLKSQAALIQDEDMSIAEKPDTDKKKKDILNDLKVPAEEHSASNHSEGKSTLDKEDGFNNLKDLESSLASFPVKPLQALKGCFDVCDDDDVNNTSPRDLDHSYGRIDNESSGPSKMSPQNSTQPKKFFSSSLQPDNFSKKVTDVDRDYPQTKYPSERNHSGPLLYRQRRDINNFPSVDDASEGAVVQRRGRFKVTSADPSSMGLSNNSSGPVTGSPTPTPTSPPKQNLVTASILPSLQCILQQNGLQREEIIKLIKHTEQSYGKNSESIEAGAVDILQASPATTREKELHSQVIQLQQSIGSLVEELQRQKMKNVQLERQLSSMVNKIEK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi143g00038 671 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 652 IPR047173 GO:0043539
Vivi143g00038 671 MobiDBLite consensus disorder prediction 448 479 - -
Vivi143g00038 671 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Vivi143g00038 671 MobiDBLite consensus disorder prediction 375 398 - -
Vivi143g00038 671 MobiDBLite consensus disorder prediction 539 556 - -
Vivi143g00038 671 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi143g00038 671 MobiDBLite consensus disorder prediction 480 494 - -
Vivi143g00038 671 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi143g00038 671 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi143g00038 671 MobiDBLite consensus disorder prediction 434 567 - -
Vivi143g00038 671 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 329 - -
Vivi143g00038 671 SUPERFAMILY Protein kinase-like (PK-like) 15 278 IPR011009 -
Vivi143g00038 671 CDD STKc_OSR1_SPAK 16 277 - -
Vivi143g00038 671 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Vivi143g00038 671 Gene3D Transferase(Phosphotransferase) domain 1 97 329 - -
Vivi143g00038 671 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Vivi143g00038 671 Coils Coil 641 668 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi143g00038 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 64.441 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vivi143g00038 Pkinase 1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi143g00038 K08835 - gmx:100778837 1035.79