Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi143g00007 ATGAAGAAGAGTGAGAGTGGTGGATATGTGAGAGCAGATCAAATAGATCTCAAGAGTTTAGATGAACAATTGCAAAGGCATCTTAGTAGAGCATGGACTATGGAGAAGAAGAATAAGGAGAAAGAAGATGAAGGTAGTGAAGTTGTAGGAAGGTCTTCTTCTAATAATACTAGACAAGAATGGGAGATTGATCCTTCTAAACTTATCATCAAAACTGTCATTGCTCGTGGTACTTTTGGGACTGTTCATCGTGGTGTTTATGACGGTCTTGATGTTGCTGTTAAGCTTCTTGATTGGGGGGAAGAGGGACATCGGTCAGATGCTGAAATTGCCTCATTGAGAGCGGCTTTTACGCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTCTTGGTGCAACAATGGGAACATCAGACCTACAGATACAAACAGAAACCGGTCATATAGGCATGCCGAGTAATCTTTGTTGTGTTGTTGTTGAGTATTGTCCTGGTGGTGCTTTGAAGTCGTATCTAATTAAAAACCGAAGAAGGAAGCTTGCTTTTAAAGTGGTTGTTCAACTAGCTCTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATAAAGAAGATTGTCCATAGAGATGTTAAAACAGAAAATATGCTTCTAGACAAGTCACGCACGTTGAAAATCGCTGATTTTGGTGTAGCTCGTATTGAAGCTTCGAATCCTCATGACATGACTGGTGAAACTGGAACGCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAGTGCATACAATAGAAAATGTGATGTGTATAGTTTTGGAATCTGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGATCTCAGTTTCTCAGAAGTAACATCAGCTGTTGTAAGACAGAATCTAAGGCCAGAGATTCCGCGATGTTGTCCAAGCTCACTGGCGAACGTGATGAAAAGATGTTGGGATGCTAATCCCGATAAGAGGCCAGAGATGGATGAAGTTGTCATCATGTTGGAAGCCATCGACACTTCAAAGGGTGGAGGTATGATCCCTGTCGATCAGCCACAAAGTTGTTTATGTTTCCGCAAGTATAGAGGACCTTGA 1116 0.4185 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKKNKEKEDEGSEVVGRSSSNNTRQEWEIDPSKLIIKTVIARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTKFLGATMGTSDLQIQTETGHIGMPSNLCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHIKKIVHRDVKTENMLLDKSRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVIMLEAIDTSKGGGMIPVDQPQSCLCFRKYRGP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi143g00007 371 CDD STKc_MAP3K-like 74 342 - -
Vivi143g00007 371 SUPERFAMILY Protein kinase-like (PK-like) 51 342 IPR011009 -
Vivi143g00007 371 Gene3D Transferase(Phosphotransferase) domain 1 168 360 - -
Vivi143g00007 371 FunFam Serine/threonine-protein kinase HT1 168 353 - -
Vivi143g00007 371 ProSiteProfiles Protein kinase domain profile. 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi143g00007 371 Gene3D Phosphorylase Kinase; domain 1 56 152 - -
Vivi143g00007 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Vivi143g00007 371 MobiDBLite consensus disorder prediction 31 58 - -
Vivi143g00007 371 MobiDBLite consensus disorder prediction 31 48 - -
Vivi143g00007 371 FunFam Kinase suppressor of Ras 1 57 152 - -
Vivi143g00007 371 PRINTS Tyrosine kinase catalytic domain signature 165 178 IPR001245 GO:0004672|GO:0006468
Vivi143g00007 371 PRINTS Tyrosine kinase catalytic domain signature 269 291 IPR001245 GO:0004672|GO:0006468
Vivi143g00007 371 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Vivi143g00007 371 PRINTS Tyrosine kinase catalytic domain signature 203 221 IPR001245 GO:0004672|GO:0006468
Vivi143g00007 371 Pfam Protein tyrosine and serine/threonine kinase 70 340 IPR001245 GO:0004672|GO:0006468
Vivi143g00007 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 345 - -
Vivi143g00007 371 SMART serkin_6 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi143g00007 2 309 MAP Kinase Kinase Kinase AT3G01490 74.928 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi143g00007 PK_Tyr_Ser-Thr 7.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi143g00007 - - gmx:100806635 702.59