Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1438g00003 ATGGCGAAAAAATATGAAGGACGGGCAGTAGGAATAGACCTCGGAACAACATATTCATGTGTTGCTGTATGGATGGAGCATCACAACAGAGTTGAGATCATACACAACGATCAAGGAAATAGAACTACACCATCTTTTGTTGCTTTTACTGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAAGTTGCAACTAACACAGGAAACACTGTCTTTGATGCTAAAAGATTAATTGGTAGAAAGTTTAGTGATCCTGTTGTTCAAAAAGATATAATGTGGTGGCCGTTTAAGGTTATTTCTGGAATGAATGATAAACCCGTGATATCCCTCGTGTATAATGGTGAAGAGAAGCAATTTTGTGCTGAGGAAATATCATCCATGGTCCTCACAAAGATGCGACAGATTGCAGAAGCATATCTGGGTTCGCCCGTCAAGAATGCTGTTGTTACTGTCCCGGCTTATTTCAATGATTCTCAGAGAAAAGCTACCATAGATGCTGGTGCTATTGCTGGCCTTAATGTCATTCGGATAATCAATGAACCTACTGCTGCAGCTATTGCATATGGTCTTGACAAGAGAAGTGAATGTGATGGTGACAAGAATATTTTTGTGTTTGATCTTGGTGGCGGAACTTTTGATGTGTCTATTCTAACAATTATGGGTGATGTCTTTGAAGTAAAAGCCACGGCTGGAAACACTCATCTCGGAGGAGAGGACTTTGATAACAGAATGGTGAATTACTTTGTAGAGGAGTTCAAGAAGAAGAATAGAGTGGACATTAGTGGGAACTCAAGAGCCTTAAGGAGGTTGAGAACTGCCTGCGAGAGAGCAAAGAGGACACTCTCTTTCGCTTTTGTCACTACTGTTGAGGTAGATTCTTTATTTCAAGGAATTGATTTTTCTTCGTCTATCACTCGTGCCAAGTTTGAGGAAATTAATATGAACCTTTTTATTGAGTGCATAAAAACGGTTGAAAGTTGTCTTAGTGATTCAAAGATACACATCAGCCATATTGATGATGTTGTTCTTGTGGGTGGCTCGTCTAGGATTCCGAAAGTGCAAGACATGTTGCAAGACTTTTTCAAAGGAAAAGATTTGTGCAAGACTATCAACCCTGACGAGGCAGTTGCTTACGGTGCAGCTGTTCAGGCTGCTATTTTGAGCAAAGGTTTTAACAATGTCCCAAACATGGTGCTTCGAGATGTTACCCCATTATCACTTGGTATCGCGGATGTTGATGATATAATGGAAGTGGTAATTCCGAGGAACACTTCTATACCGGCCAGAAGTACAAAAGGATTTGCTACTGTTACAGATAACCATTGCAGTGTCTCTATTAAGGTTTACGAGGGCGAGAGAGCAAAAGCTAGTAACAACAATCTGCTTGGTATGTTTATTCTTTCTTGCCTTCCCGGGGCTCCTCGTGGTCAGCCCTTGGAGGTATGCTTTGTCATTGATGAAAATGGTATCTTAATTGTTTCTGCTAAGGAAATATCTACTGGAAATACAAACGAGATCACCATAACGAATGACAAAGAAAGATTATCAACATTCGAAATTCAAAAAATGATTGAAGAAGCTGAGACATACCATGAGGAAGATAAGAAGTTTTTGAGGAAGGCCAAGGTAATGAGTGCATTGGATTCTTGTGTTTACAATATGAAGAATTTTTTGAAGAATGACCGTTATTTAATGCTCTCCTCTCAAGAAAGTGAGAAGATCAAGAATGCAATTACTGTGGCCACAAATTTGCTTGATAAGAATAACAAACAGAAAGAAGTAGATGTTCTTGAGGATCATCTTAAGGAGTTGGAGAGGATGTTAGAAAATCTTGTTGTCAAGAGTAGGTAG 1854 0.3948 MAKKYEGRAVGIDLGTTYSCVAVWMEHHNRVEIIHNDQGNRTTPSFVAFTDDQRLIGDAAKNQVATNTGNTVFDAKRLIGRKFSDPVVQKDIMWWPFKVISGMNDKPVISLVYNGEEKQFCAEEISSMVLTKMRQIAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVIRIINEPTAAAIAYGLDKRSECDGDKNIFVFDLGGGTFDVSILTIMGDVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKKKNRVDISGNSRALRRLRTACERAKRTLSFAFVTTVEVDSLFQGIDFSSSITRAKFEEINMNLFIECIKTVESCLSDSKIHISHIDDVVLVGGSSRIPKVQDMLQDFFKGKDLCKTINPDEAVAYGAAVQAAILSKGFNNVPNMVLRDVTPLSLGIADVDDIMEVVIPRNTSIPARSTKGFATVTDNHCSVSIKVYEGERAKASNNNLLGMFILSCLPGAPRGQPLEVCFVIDENGILIVSAKEISTGNTNEITITNDKERLSTFEIQKMIEEAETYHEEDKKFLRKAKVMSALDSCVYNMKNFLKNDRYLMLSSQESEKIKNAITVATNLLDKNNKQKEVDVLEDHLKELERMLENLVVKSR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1438g00003 617 FunFam Heat shock 70 kDa protein 391 545 - -
Vivi1438g00003 617 Pfam Hsp70 protein 9 613 IPR013126 GO:0005524|GO:0140662
Vivi1438g00003 617 FunFam Heat shock 70 kDa 237 320 - -
Vivi1438g00003 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 542 IPR029047 -
Vivi1438g00003 617 PANTHER HEAT SHOCK PROTEIN 70KDA 9 579 IPR013126 GO:0005524|GO:0140662
Vivi1438g00003 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 516 612 IPR029048 -
Vivi1438g00003 617 Coils Coil 588 615 - -
Vivi1438g00003 617 Gene3D - 10 386 - -
Vivi1438g00003 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Vivi1438g00003 617 FunFam Heat shock protein 70 10 200 - -
Vivi1438g00003 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 148 168 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 211 221 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 339 355 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 60 68 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 477 493 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 371 391 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi1438g00003 617 PRINTS 70kDa heat shock protein signature 397 416 - -
Vivi1438g00003 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 545 IPR029047 -
Vivi1438g00003 617 Gene3D - 194 368 - -
Vivi1438g00003 617 FunFam heat shock 70 kDa protein-like 73 128 - -
Vivi1438g00003 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Vivi1438g00003 617 Gene3D - 546 616 IPR029048 -
Vivi1438g00003 617 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Vivi1438g00003 617 Gene3D - 73 128 - -
Vivi1438g00003 617 SUPERFAMILY Actin-like ATPase domain 198 389 IPR043129 -
Vivi1438g00003 617 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1438g00003 1 615 Calmodulin-binding Proteins AT3G12580 64.563 0.0 808