Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1432g00006 ATGGATGGGAAGTCTAACCTTCCGATCAAGCCAGATTCTTCTTCCCCGAGCTTCGTCCGCAACTTTCAGGCCGCCCTGAAGCGCCACCGTCCCATCGCTACAGGGCAATCCAATATCATTAGGCCAAGACGCACTATTCTTGTTAAACCACAGGATTCACTCACACAAAGAAACAACGATTCTGAAGCTAGCACTGTTGGTAACCCTTCTCAAGATGCAAATGTTGACAGCAAAGTTGCTAAAGGGGCCAATGATGAAAAGGCCATTGAGTTGGAGAGTTTGTCTTCTTATATGAGTTCACTTGGATTCACAGAAATGGAATATGTTGAAGGCAACCAACATGAAGGTTCGAGTGGATTCACCAATGATGATTCAAAGCAATCGAAAATTCAGGAGGCTGGGCCTGATGGAGGAGTAAGTTGCTCCATGTTGCCGAGAAGAGGTGCGGTTACACGGGATAATTTGCACCAGTTCAGAAACTTTCTTAGTCAGCCAGCAACACAGTCTTCGGTGGTTGGACCTTCGTGTGCCACAACTACCTCGGTCAATTCAACTTCAGCTCCTATGATGAATTCAACTACCCGTTTGAATATGGAAAGTGGCCCTAGTGTAGCAGCCGATCCTTTGGGGAAAGCCGAAAGAGTTATGGAATCAGCAAATATAGACACAGGTGTTGAAAAAGCGAATAAATTATCAGTTGATAAGGCTACAACTGTGGTGCAAACATTTGATTCTTGTGCCGACTCTGAGTTGGCATTTAAAGGGAGTGAGCAATCTAAGGAGCAACCAGAATGCATGTTAAAAGAAACTCACTTTTCAAAATATGCTTCTTCTGATGGTGACAAGTTGATCAAAGGGAAAGAGCCTGCAGATGTTATCAGCGTACAGTCTCAGGCACCGGCGCCCAAAACATCATCTTTGGACGTGAAGTCTGAATATTCTAAGTTAGAAAAACGAGAGAAGGCTGCAAGTAGTAAAGGTTCCTCAGTCGCTAAGAAAAGGACTTATGACCCAGATTTATTTTTCAAGGTCAATGGCAAGCTTTATCAACGTCTTGGCAAGATAGGAAGTGGAGGAAGTAGTGAGGTTCACAAGGTGATTTCATCAGATTGTAATATATTTGCACTTAAGAAGATCAAACTCAGGGGTCGTGATTATGCTACTGCATATGGATTTTGTCAAGAGATTGAGTATCTTAATAGGCTGAAAGGAAAGGACAATATTATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTCGAAGAAGTTATGAAAGGCTCTCTTTGTATTAAGGATGGCCGGGTCAAAGATGATGGATATATATACATGGTTCTTGAATACGGTGAAATTGATTTAGCTCACATGTTGTCACAGCAGTGGAAGAAGCTGGGTGAATCAAACGAGATCATAGATGAAAATTGGCTCCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATTCACGAGGAACGTATTGTGCACTCTGACTTGAAGCCTGCTAACTTCCTCCTCGTCAAAGGTTCCCTAAAATTAATTGATTTCGGTATCGCCAAAGCAATAATGAGCGATACTACTAATATCCAACGGGAATCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAAGCATTTATGTGTAATGAGACTGATGCGAACGGAAACGTCATCAAGTGTGGTCGGCCATCAGATATCTGGTCTTTGGGGTGCATCCTTTATCAAATGGTATATGGGAGAACCCCTTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATTACAGATCCCAAACATGAAATCACCTATGAACCACTTTCAAATCCATGGTTAGTGGATCTCATGAAGAGGTGTTTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCATGTACTACCTCATCCATCTTTGTCCCAAGACCATAGCTGTAAATTTGTACAACTTGTTGCTGAACCTTGTGCATATGACCCTGAAGCATCCCAACTTTGTCATCAACTCCAACGTATACTGGTTGATCCACTTGAGTCAGTGAATCACTCACTAAACTCAAGAGAACAACAAAGAACACTGTTGTCCAAACTGTCTGAACTCTGTATTCAGCTGCGGGAGCGTTTGATGGGTACTGATATTCCGTAG 2181 0.4241 MDGKSNLPIKPDSSSPSFVRNFQAALKRHRPIATGQSNIIRPRRTILVKPQDSLTQRNNDSEASTVGNPSQDANVDSKVAKGANDEKAIELESLSSYMSSLGFTEMEYVEGNQHEGSSGFTNDDSKQSKIQEAGPDGGVSCSMLPRRGAVTRDNLHQFRNFLSQPATQSSVVGPSCATTTSVNSTSAPMMNSTTRLNMESGPSVAADPLGKAERVMESANIDTGVEKANKLSVDKATTVVQTFDSCADSELAFKGSEQSKEQPECMLKETHFSKYASSDGDKLIKGKEPADVISVQSQAPAPKTSSLDVKSEYSKLEKREKAASSKGSSVAKKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCNIFALKKIKLRGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSLCIKDGRVKDDGYIYMVLEYGEIDLAHMLSQQWKKLGESNEIIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNVIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPKHEITYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVLPHPSLSQDHSCKFVQLVAEPCAYDPEASQLCHQLQRILVDPLESVNHSLNSREQQRTLLSKLSELCIQLRERLMGTDIP 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1432g00006 726 Gene3D Transferase(Phosphotransferase) domain 1 462 647 - -
Vivi1432g00006 726 ProSiteProfiles Protein kinase domain profile. 349 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1432g00006 726 FunFam serine/threonine-protein kinase mph1 isoform X2 342 429 - -
Vivi1432g00006 726 SUPERFAMILY Protein kinase-like (PK-like) 343 651 IPR011009 -
Vivi1432g00006 726 Pfam Protein kinase domain 349 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1432g00006 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Vivi1432g00006 726 FunFam serine/threonine-protein kinase mph1 isoform X1 463 645 - -
Vivi1432g00006 726 MobiDBLite consensus disorder prediction 114 128 - -
Vivi1432g00006 726 SMART serkin_6 349 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1432g00006 726 Gene3D Phosphorylase Kinase; domain 1 342 429 - -
Vivi1432g00006 726 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Vivi1432g00006 726 CDD PKc_Mps1 347 642 IPR027084 -
Vivi1432g00006 726 MobiDBLite consensus disorder prediction 113 141 - -
Vivi1432g00006 726 MobiDBLite consensus disorder prediction 49 77 - -
Vivi1432g00006 726 PANTHER MIXED LINEAGE PROTEIN KINASE 40 673 - -
Vivi1432g00006 726 MobiDBLite consensus disorder prediction 169 189 - -
Vivi1432g00006 726 MobiDBLite consensus disorder prediction 33 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1432g00006 355 642 MAP Kinase Kinase Kinase AT4G08470 28.328 6.27e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vivi1432g00006 Pkinase 4.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1432g00006 K08866 - gmx:100788990 956.436