Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1432g00005 ATGGATGGGAAGTCTAACCTTCCGATCAAGCCAGATTCTTCTTCCCCGAGCTTCGTCCGCAACTTTCAGGCCGCCCTGAAGCGCCACCGTCCCATCGCTACAGGGCAATCCAATATCATTAGGCCAAGACGCACTATTCTTGTTAAACCACAGGATTCACTCACACAAAGAAACAACGATTCTGAAGCTAGCACTGTTGGTAACCCTTCTCAAGATGCAAATGTTGACAGCAAAGTTGCTAAAGAAATGGAATATGTTGAAGGCAACCAACATGAAGGTTCGAGTGGATTCACCAATGATGATTCAAAGCAATCGAAAATTCAGGAGGCTGGGCCTGATGGAGGAGTAAGTTGCTCCATGTTGCCGAGAAGAGGTGCGGTTACACGGGATAATTTGCACCAGTTCAGAAACTTTCTTAGTCAGCCAGCAACACAGTCTTCGGTGGTTGGACCTTCGTGTGCCACAACTACCTCGGTCAATTCAACTTCAGCTCCTATGATGAATTCAACTACCCGTTTGAATATGGAAAGTGGCCCTAGTGTAGCAGCCGATCCTTTGGGGAAAGCCGAAAGAGTTATGGAATCAGCAAATATAGACACAGGTGTTGAAAAAGCGAATAAATTATCAGTTGATAAGGCTACAACTGTGGTGCAAACATTTGATTCTTGTGCCGACTCTGAGTTGGCATTTAAAGGGAGTGAGCAATCTAAGGAGCAACCAGAATGCATGTTAAAAGAAACTCACTTTTCAAAATATGCTTCTTCTGATGGTGACAAGTTGATCAAAGGGAAAGAGCCTGCAGATGTTATCAGCGTACAGTCTCAGGCACCGGCGCCCAAAACATCATCTTTGGACGTGAAGTCTGAATATTCTAAGTTAGAAAAACGAGAGAAGGCTGCAAGTAGTAAAGGTTCCTCAGTCGCTAAGAAAAGGACTTATGACCCAGATTTATTTTTCAAGGTCAATGGCAAGCTTTATCAACGTCTTGGCAAGATAGGAAGTGGAGGAAGTAGTGAGGTTCACAAGGTGATTTCATCAGATTGTAATATATTTGCACTTAAGAAGATCAAACTCAGGGGTCGTGATTATGCTACTGCATATGGATTTTGTCAAGAGATTGAGTATCTTAATAGGCTGAAAGGAAAGGACAATATTATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTCGAAGAAGTTATGAAAGGCTCTCTTTGTATTAAGGATGGCCGGGTCAAAGATGATGGATATATATACATGGTTCTTGAATACGGTGAAATTGATTTAGCTCACATGTTGTCACAGCAGTGGAAGAAGCTGGGTGAATCAAACGAGATCATAGATGAAAATTGGCTCCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATTCACGAGGAACGTATTGTGCACTCTGACTTGAAGCCTGCTAACTTCCTCCTCGTCAAAGGTTCCCTAAAATTAATTGATTTCGGTATCGCCAAAGCAATAATGAGCGATACTACTAATATCCAACGGGAATCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAAGCATTTATGTGTAATGAGACTGATGCGAACGGAAACGTCATCAAGTGTGGTCGGCCATCAGATATCTGGTCTTTGGGGTGCATCCTTTATCAAATGGTATATGGGAGAACCCCTTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATTACAGATCCCAAACATGAAATCACCTATGAACCACTTTCAAATCCATGGTTAGTGGATCTCATGAAGAGGTGTTTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCATGTACTACCTCATCCATCTTTGTCCCAAGACCATAGCTGTAAATTTGTACAACTTGTTGCTGAACCTTGTGCATATGACCCTGAAGCATCCCAACTTTGTCATCAACTCCAACGTATACTGGTTGATCCACTTGAGTCAGTGAATCACTCACTAAACTCAAGAGAACAACAAAGAACACTGTTGTCCAAACTGTCTGAACTCTGTATTCAGCTGCGGGAGCGTTTGATGGGTACTGATATTCCGTAG 2112 0.4242 MDGKSNLPIKPDSSSPSFVRNFQAALKRHRPIATGQSNIIRPRRTILVKPQDSLTQRNNDSEASTVGNPSQDANVDSKVAKEMEYVEGNQHEGSSGFTNDDSKQSKIQEAGPDGGVSCSMLPRRGAVTRDNLHQFRNFLSQPATQSSVVGPSCATTTSVNSTSAPMMNSTTRLNMESGPSVAADPLGKAERVMESANIDTGVEKANKLSVDKATTVVQTFDSCADSELAFKGSEQSKEQPECMLKETHFSKYASSDGDKLIKGKEPADVISVQSQAPAPKTSSLDVKSEYSKLEKREKAASSKGSSVAKKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCNIFALKKIKLRGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSLCIKDGRVKDDGYIYMVLEYGEIDLAHMLSQQWKKLGESNEIIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNVIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPKHEITYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVLPHPSLSQDHSCKFVQLVAEPCAYDPEASQLCHQLQRILVDPLESVNHSLNSREQQRTLLSKLSELCIQLRERLMGTDIP 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1432g00005 703 SUPERFAMILY Protein kinase-like (PK-like) 320 628 IPR011009 -
Vivi1432g00005 703 FunFam serine/threonine-protein kinase mph1 isoform X2 319 406 - -
Vivi1432g00005 703 MobiDBLite consensus disorder prediction 91 105 - -
Vivi1432g00005 703 Gene3D Phosphorylase Kinase; domain 1 319 406 - -
Vivi1432g00005 703 SMART serkin_6 326 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1432g00005 703 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Vivi1432g00005 703 MobiDBLite consensus disorder prediction 50 74 - -
Vivi1432g00005 703 PANTHER MIXED LINEAGE PROTEIN KINASE 43 650 - -
Vivi1432g00005 703 Pfam Protein kinase domain 326 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1432g00005 703 FunFam serine/threonine-protein kinase mph1 isoform X1 440 622 - -
Vivi1432g00005 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Vivi1432g00005 703 MobiDBLite consensus disorder prediction 88 118 - -
Vivi1432g00005 703 ProSiteProfiles Protein kinase domain profile. 326 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1432g00005 703 CDD PKc_Mps1 324 619 IPR027084 -
Vivi1432g00005 703 MobiDBLite consensus disorder prediction 145 166 - -
Vivi1432g00005 703 Gene3D Transferase(Phosphotransferase) domain 1 439 624 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1432g00005 332 619 MAP Kinase Kinase Kinase AT4G08470 28.328 5.58e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vivi1432g00005 Pkinase 4.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1432g00005 K08866 - gmx:100788990 927.546