Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi142g00003 ATGCATAATGCAGGTGATAGAGTGAAGTTTAGCTGCCCTTCTTTTGATGGCTTGCATGAAACATCTTCAAGGGGCCCAACTAATGGTAGTCAGGGAAAGATTGTCTTGCTATTTGATGATAATCCACACTCTAAAAAAATTGGTGTGAGATTTGACGAACTCATACATGACGGCCTTGATCTTGGAGGTGCATCTGAGGCTGGTCGAGGCTTTTTCTGCAATGTCAATGATCTTCATTTGGAAAACAGTGGTGCGGCAGTACTGGACAAATTACATATTAATACATTGTTTGAGGTTGTTTATAGGGAGAGTAGAAGTACACCATTCATTTTGTTCATGAAAAATGCCGAGAAGTCAATAGTTGGAAAGGGATGTCCATTTTCATTTAGACATAAACTTGATACACTTCCAAAGAATGTGGTGGTAATAGGTTCACACACTCTTCCTGACAATGGCAATTGCAAGAAGAAGTTGCATCCCGCTGGTCTGCAGCCGCATCCCGCTGGTTTACTTTTAAAAAGTCTTGGTAGCAATAAGGCTGCACCTCTTGAATTGGCCACCTTGGGTAGTCCTGGACAATTGCATGACAAGGAAAGGGAAGTATCAAAACTAAATGAAGCTTTAACTAATATTTTCCCAAATAAAATTAAAATTCACATACCACAGGATGAGGTACTTCTAGCATCATGGAAGCAGCAGCTGGCTCGAGATGTAGAGGCTTTGAAAATAAAAGCAAATTTACATCAACTACACATTGTTTTGAGCCGTTTTGGAATTGAATATGAAGAAGGACTTGAGACCTTGTGCATTAAAGATCAGACACTTACGAATGAAAATGCAAAGAAGATCATTAGTTGGGCTCTAAGCCACCACCACATGCAGAATTTGGAAGCTAATCCAGATTCAAAGCTTATATTGTCGTGTGAGAACATCCATTATGGATGTGGGATGTTGCAGTCTCTCCAAAATGAGTCAAAAGGCATGAAGAACTCTCATAAGGATATTGTAACAGAAAATGATTTTGAAAATAGACTTTTGGCTGATGTTATTCCACCAAGCGACATCAATGTTACTTTTGATGATATTGGGGCTCTTGAAAATGTTAAGGATACGCTGAAGGAGTTGGTGATGCTTCCTTTGCAGAGGCCTGAGCTTTTCTGTAAAGGGCAATTAACCAAGCCATGCAAGGGTATCCTATTATTTGGCCCCCCTGGAACAGGCAAAACAATGCTTGCAAAGGCAATTGCAACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAAGATTATGTCTAAGTGGTTTGGTGAAGCTGAGAAGTTCGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAGCTGCTCCTAGTGTTATATTTATTGATGAAGTTGACAGCATGTTGGGTCGAAGAGAAAATCCAGGGGAGCACGAGGCCATGCGGAGAATGAAAAATGAATTCATGGTTAATTGGGATGGTTTACGTACAAAGGGTTCTGAACGAGTTCTTGTGCTTGCTGCCACTAACAGGCCTTTTGACCTAGACGAGGCTGTCATTAGGAGGCTACCACGAAGATTGATGATAAATTTGCCAGATGCTCCAAATAGAGCTAAAATATTGAAAGTTATACTTGCAAAAGAGGAATTGTCTCCTGATGTTGATTTGGATGCAGTTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCTCATTGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTGCTAGTGCTCTAGAAGAAGGTCGACCTGCTCCTGCATTATGTAACAGCGGGGACATCCGATCTTTAAACATGAAAGACTTTAAACATGCTCACCAACAGGTGTGTGCCAGTATTTCTCCTGACTCAGTAAATATGACACAGCTTGTACATTGGAATGAACTATATGGTGAAGGTGGTTCAAGAATAAAACAAACACTGAGCTATTTCATGTAG 1989 0.4027 MHNAGDRVKFSCPSFDGLHETSSRGPTNGSQGKIVLLFDDNPHSKKIGVRFDELIHDGLDLGGASEAGRGFFCNVNDLHLENSGAAVLDKLHINTLFEVVYRESRSTPFILFMKNAEKSIVGKGCPFSFRHKLDTLPKNVVVIGSHTLPDNGNCKKKLHPAGLQPHPAGLLLKSLGSNKAAPLELATLGSPGQLHDKEREVSKLNEALTNIFPNKIKIHIPQDEVLLASWKQQLARDVEALKIKANLHQLHIVLSRFGIEYEEGLETLCIKDQTLTNENAKKIISWALSHHHMQNLEANPDSKLILSCENIHYGCGMLQSLQNESKGMKNSHKDIVTENDFENRLLADVIPPSDINVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSKIMSKWFGEAEKFVKAVFSLASKAAPSVIFIDEVDSMLGRRENPGEHEAMRRMKNEFMVNWDGLRTKGSERVLVLAATNRPFDLDEAVIRRLPRRLMINLPDAPNRAKILKVILAKEELSPDVDLDAVASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKERASALEEGRPAPALCNSGDIRSLNMKDFKHAHQQVCASISPDSVNMTQLVHWNELYGEGGSRIKQTLSYFM 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi142g00003 662 ProSitePatterns AAA-protein family signature. 501 520 IPR003960 GO:0005524|GO:0016887
Vivi142g00003 662 SMART AAA_5 394 531 IPR003593 GO:0016887
Vivi142g00003 662 Pfam AAA+ lid domain 551 586 IPR041569 -
Vivi142g00003 662 Pfam ATPase family associated with various cellular activities (AAA) 398 527 IPR003959 GO:0005524|GO:0016887
Vivi142g00003 662 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 81 661 - -
Vivi142g00003 662 Gene3D - 356 636 IPR027417 -
Vivi142g00003 662 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 356 532 - -
Vivi142g00003 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 634 IPR027417 -
Vivi142g00003 662 Gene3D - 530 624 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi142g00003 393 599 Calmodulin-binding Proteins AT3G56690 38.679 1.06e-33 136