Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1428g00005 ATGTCGTCGAACCCTCCGCCGCCAGAAAATGATCCACCTCCCGCGACACCGTCTCCGGTATCCTCTAGAGCCAACAAGCTTCAAAAAACCCCTCACATTCTGAGCCGACGCACGGCGGCTTCATCCATCGATGAAGTCGCCGATGAAGTCACGGATTTCGCCGAATTCGAAGACGAAGAGAATAAAATACTCGAAGAAGAATGCGTTGTTCCTCAACGTCATTTCGAACGCGGCGAATCATCATCGTCTTCTTCTTCTTCCTCCATTTTGCTCGCGTCTTCTTTAGGTCTCAATAGCATCCGAACGCGATTATCGCCTCTTCGTCATTCTTCGTCTGCCGGTGCTCCTGCCTTCGCCATAAAAGAAGCGGCTATTCCGGTCAGTATCAACAATGTCGTCAAATCTAGATCCAAATCTTCACATCCGAGAGACCTAGGGGAAAAAGTTCATTGGAATCAATCCAAATCGTTGAAAGCTCATCATTCACATCTTCTCCCTGTGCCGGAGGCCAATCATGCAGCTTTCGCGGAAATACAATCCCCACGTTTTCAGGAAATCCTTAGACTTACAAGTCGCAGGCATAAGAGAAACCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGAGTTAGGCCTTATCCAACCTGGAAACACCGTGCCTCTTGGCACGTCGAGGAAGTCATGGTGGAGATTAGAACTAAGTTTGAAAAACTAAAGGAAGAAGTTGATTCTGATTTGGGTGGTTTTGCTGGTGATTTGGTGGGTACTCTTGAAAAAATATCTGGATCTCCTTGTGAATGGAAAGAGGGGCTGGAAGATTTATTGGTTGTTGCTCGAGAATGTGCAACGATGACAGCTGCTGAGTTTTGGATCAAATGTGAAACTATTGTTCAAAAACTAGATGATAAACGCCAAGAAATACCAGTGGGGATCCTTAAACAAGCTCACACACGCCTGCTATTTATTCTCTCTAGGTGCACTCGTCTTGTGCAATTCCAGAAGGAAAGTGATCAAAAAGAACAAGATCACGTTCTTAGTCTTCACCAACTCAGTGATCTTGGAGTATATTCAGAGCAAATTTTGAAGGCTGCAGAGAATTGCAGCGTACCACCTAGTGGACATGAGATGGCTGAGAAGCAGTTACCAAAGTCACATGGAAAAGAACAAGACAAATTGTTAACAAAACAAAATCAAGCTGATGAACATGCAAGTGCTGCGACTGACAGCGTGGAAGTTACTACAGCTAAAAGTGTTGAGTCAACTGCCAGTAGCTATAAAATGGCTTCTTGGAGAAAACTTCCATCAGCTGCTGAGAAAAAACGCGTATGTTCAGATACACTAGTGAAAGATGAACACGCCGAAACCTTGGATACTTCATCATGTCAACCTGAACATTCACAAACGTCATCTAGAACGCGAAAGGACTCTTGGGGATTCTGGGGAGATCAGCAAAATCTACCATATGATTATTCAATGATCATCTGCAGGATTTGTGAGGTTGAAATACCAATTGTAAGTGTGGAGGAGCACTCTCGAATATGCACAATTGCTGATAAATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTGGAGAGAGTTTCAGAAACTATTGAAAGGTTACTTGAATCTTGGACACCAAAAAGCACACCTAAAAGCACTGATACTCATGGAGAAAGCTTTGAGTTTGCGAGAGTGTCAACATCGAGTTTACATGAGGAGTTCAATGAGTTGTCTCTAGAAAGAAATAACTTGTCTAGTAGATGCTCTGAAGACATGGTTGACCCTGCTCCTGAACCTGATATTAGTTTTGTTGCAGATGATCTAAACCTTTCACCTGAAATAACATGTGATACTCAAATATGCTCAAAACCTGATCATAGCGCCAAGGTATCTTCACCTGGAAGCTTGACACCGCGATCACCATTGATTACACCAAGAACAAGTCAGATAGAAATGTTACTAGGCGGAAGAAGGCATATATCAGAACTTGAGAGTTATGACCAGATAAACAAGCTAGTTGAAATTGCTCGTGCTGTTGCAAATGTGAACACCTGTGACTACAGTTCTTTGGAGTATATGCTTGAACGTGTGGAAGACCTGAAATACGCAATTCAAGACAGAAAAGAAGATGCACTTATTGTGGAGACTTTTGGTCGACGAATAGAGAAACTTTTGCTGGAGAAATATGCTACCCTTTGTGGGCAAATAGAAGATGAAAAGGTAGACTCATCAAATAGCATGGCTGATGAAGAGAGTTCTGTAGAAGATGATACAGTCCGCAGCCTTCGTGCAAGCCCGATTAATCCTTGTTCTAAGGACAGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGCAGGGGTGCGTTTGGACGAGTTTTTCTTGCCAGAAAAAGAGCAACTGGTGATTTATTTGCTATTAAGGTTCTAAAAAAGGCAGATATGATTCGTAAAAATTCAGTTCAAGATATTTTGGCTGAGCGAGACATCCTTATATCTATTCGAAATCCTTTTGTGGTCCGTTTTTTCTATTCTTTCACATGTAGAGAAAATCTTTATTTAGTTATGGAGTATTTAAATGGTGGGGATCTCTATTCTATGTTGAGAAACCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCGTTGGAGTATTTGCATACCCAACATATAATTCACAGAGACTTGAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTAACGGACTTTGGACTCTCAAAAGTTGGTCTCATCAACAGCACCGACGATTTATCAGCACCCACATCTTTCGCTAGTGGCTTTTTAGGCGATGATAAACCAAAATCTCGACATGTTTCAAAAAGGGAAGAACGTCAACAACAATCAGTGGTCGGCACTCCAGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTGCAACGGCAGATTGGTGGTCGGTAGGTGTCATACTTTATGAGCTTCTTGTGGGTGTTCCACCTTTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCGAAGTATCCCGAGGAGATAAGCTATGAAGCATATGATTTGATGAATAAATTATTAATCGAAAACCCAGTACAAAGGTTAGGTACAACAGGAGCTTCAGAAGTTAAAAGCCATGCTTTCTTCAAGGACATTAATTGGGATACGCTAGCCAGGCAGAAGGCTATGTTCATACCATCGACTGAAGCTCTTGATACAAGTTATTTTATGAGCCGCTACATTTGGAATCCAGAGGATGAACACTGTGCTGGAGGTAGTGATTTTGATGACATTACTGAATCTTACACCAGTGGTTCAGGAAGCGATTCATATGAAGATGAAGATGAATGTGGTAGTTTAGCGGGGTTCGCTCATTCAGATTCAAACCATCCTGTGTCGCAGTATTCATTTAGTAACTTCTCATTTAAGAATTTGTCTCAACTAGTTACTATCAATTATGATGTGGTGTACAAGAACAAAGAATCGCCCGATGACTCCAATCCATCTGGTTCCTGA 3582 0.4157 MSSNPPPPENDPPPATPSPVSSRANKLQKTPHILSRRTAASSIDEVADEVTDFAEFEDEENKILEEECVVPQRHFERGESSSSSSSSSILLASSLGLNSIRTRLSPLRHSSSAGAPAFAIKEAAIPVSINNVVKSRSKSSHPRDLGEKVHWNQSKSLKAHHSHLLPVPEANHAAFAEIQSPRFQEILRLTSRRHKRNPDIKSFSHELNSKGVRPYPTWKHRASWHVEEVMVEIRTKFEKLKEEVDSDLGGFAGDLVGTLEKISGSPCEWKEGLEDLLVVARECATMTAAEFWIKCETIVQKLDDKRQEIPVGILKQAHTRLLFILSRCTRLVQFQKESDQKEQDHVLSLHQLSDLGVYSEQILKAAENCSVPPSGHEMAEKQLPKSHGKEQDKLLTKQNQADEHASAATDSVEVTTAKSVESTASSYKMASWRKLPSAAEKKRVCSDTLVKDEHAETLDTSSCQPEHSQTSSRTRKDSWGFWGDQQNLPYDYSMIICRICEVEIPIVSVEEHSRICTIADKCDLKGLTVNERLERVSETIERLLESWTPKSTPKSTDTHGESFEFARVSTSSLHEEFNELSLERNNLSSRCSEDMVDPAPEPDISFVADDLNLSPEITCDTQICSKPDHSAKVSSPGSLTPRSPLITPRTSQIEMLLGGRRHISELESYDQINKLVEIARAVANVNTCDYSSLEYMLERVEDLKYAIQDRKEDALIVETFGRRIEKLLLEKYATLCGQIEDEKVDSSNSMADEESSVEDDTVRSLRASPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNSVQDILAERDILISIRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYIAEVVLALEYLHTQHIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPTSFASGFLGDDKPKSRHVSKREERQQQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGVPPFNAEHPQQIFDNIINRDIQWPKYPEEISYEAYDLMNKLLIENPVQRLGTTGASEVKSHAFFKDINWDTLARQKAMFIPSTEALDTSYFMSRYIWNPEDEHCAGGSDFDDITESYTSGSGSDSYEDEDECGSLAGFAHSDSNHPVSQYSFSNFSFKNLSQLVTINYDVVYKNKESPDDSNPSGS 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1428g00005 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Vivi1428g00005 1193 ProSiteProfiles AGC-kinase C-terminal domain profile. 1072 1174 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 20 37 - -
Vivi1428g00005 1193 Gene3D Transferase(Phosphotransferase) domain 1 867 1089 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 456 478 - -
Vivi1428g00005 1193 PANTHER SERINE/THREONINE-PROTEIN KINASE 539 1162 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 380 399 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 1 41 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 952 966 - -
Vivi1428g00005 1193 FunFam probable serine/threonine protein kinase IREH1 781 871 - -
Vivi1428g00005 1193 SMART serkin_6 783 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1428g00005 1193 Pfam Protein kinase domain 783 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 1 19 - -
Vivi1428g00005 1193 Gene3D Phosphorylase Kinase; domain 1 781 1098 - -
Vivi1428g00005 1193 CDD STKc_MAST_like 789 1076 - -
Vivi1428g00005 1193 ProSiteProfiles Protein kinase domain profile. 783 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1428g00005 1193 SUPERFAMILY Protein kinase-like (PK-like) 780 1100 IPR011009 -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 1123 1145 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 370 413 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 461 478 - -
Vivi1428g00005 1193 MobiDBLite consensus disorder prediction 946 971 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1428g00005 1 1192 AGC Kinase Gene Family AT5G62310 60.473 0.0 1377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vivi1428g00005 Pkinase 1.9e-64 CL0016