Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1428g00005 | ATGTCGTCGAACCCTCCGCCGCCAGAAAATGATCCACCTCCCGCGACACCGTCTCCGGTATCCTCTAGAGCCAACAAGCTTCAAAAAACCCCTCACATTCTGAGCCGACGCACGGCGGCTTCATCCATCGATGAAGTCGCCGATGAAGTCACGGATTTCGCCGAATTCGAAGACGAAGAGAATAAAATACTCGAAGAAGAATGCGTTGTTCCTCAACGTCATTTCGAACGCGGCGAATCATCATCGTCTTCTTCTTCTTCCTCCATTTTGCTCGCGTCTTCTTTAGGTCTCAATAGCATCCGAACGCGATTATCGCCTCTTCGTCATTCTTCGTCTGCCGGTGCTCCTGCCTTCGCCATAAAAGAAGCGGCTATTCCGGTCAGTATCAACAATGTCGTCAAATCTAGATCCAAATCTTCACATCCGAGAGACCTAGGGGAAAAAGTTCATTGGAATCAATCCAAATCGTTGAAAGCTCATCATTCACATCTTCTCCCTGTGCCGGAGGCCAATCATGCAGCTTTCGCGGAAATACAATCCCCACGTTTTCAGGAAATCCTTAGACTTACAAGTCGCAGGCATAAGAGAAACCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGAGTTAGGCCTTATCCAACCTGGAAACACCGTGCCTCTTGGCACGTCGAGGAAGTCATGGTGGAGATTAGAACTAAGTTTGAAAAACTAAAGGAAGAAGTTGATTCTGATTTGGGTGGTTTTGCTGGTGATTTGGTGGGTACTCTTGAAAAAATATCTGGATCTCCTTGTGAATGGAAAGAGGGGCTGGAAGATTTATTGGTTGTTGCTCGAGAATGTGCAACGATGACAGCTGCTGAGTTTTGGATCAAATGTGAAACTATTGTTCAAAAACTAGATGATAAACGCCAAGAAATACCAGTGGGGATCCTTAAACAAGCTCACACACGCCTGCTATTTATTCTCTCTAGGTGCACTCGTCTTGTGCAATTCCAGAAGGAAAGTGATCAAAAAGAACAAGATCACGTTCTTAGTCTTCACCAACTCAGTGATCTTGGAGTATATTCAGAGCAAATTTTGAAGGCTGCAGAGAATTGCAGCGTACCACCTAGTGGACATGAGATGGCTGAGAAGCAGTTACCAAAGTCACATGGAAAAGAACAAGACAAATTGTTAACAAAACAAAATCAAGCTGATGAACATGCAAGTGCTGCGACTGACAGCGTGGAAGTTACTACAGCTAAAAGTGTTGAGTCAACTGCCAGTAGCTATAAAATGGCTTCTTGGAGAAAACTTCCATCAGCTGCTGAGAAAAAACGCGTATGTTCAGATACACTAGTGAAAGATGAACACGCCGAAACCTTGGATACTTCATCATGTCAACCTGAACATTCACAAACGTCATCTAGAACGCGAAAGGACTCTTGGGGATTCTGGGGAGATCAGCAAAATCTACCATATGATTATTCAATGATCATCTGCAGGATTTGTGAGGTTGAAATACCAATTGTAAGTGTGGAGGAGCACTCTCGAATATGCACAATTGCTGATAAATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTGGAGAGAGTTTCAGAAACTATTGAAAGGTTACTTGAATCTTGGACACCAAAAAGCACACCTAAAAGCACTGATACTCATGGAGAAAGCTTTGAGTTTGCGAGAGTGTCAACATCGAGTTTACATGAGGAGTTCAATGAGTTGTCTCTAGAAAGAAATAACTTGTCTAGTAGATGCTCTGAAGACATGGTTGACCCTGCTCCTGAACCTGATATTAGTTTTGTTGCAGATGATCTAAACCTTTCACCTGAAATAACATGTGATACTCAAATATGCTCAAAACCTGATCATAGCGCCAAGGTATCTTCACCTGGAAGCTTGACACCGCGATCACCATTGATTACACCAAGAACAAGTCAGATAGAAATGTTACTAGGCGGAAGAAGGCATATATCAGAACTTGAGAGTTATGACCAGATAAACAAGCTAGTTGAAATTGCTCGTGCTGTTGCAAATGTGAACACCTGTGACTACAGTTCTTTGGAGTATATGCTTGAACGTGTGGAAGACCTGAAATACGCAATTCAAGACAGAAAAGAAGATGCACTTATTGTGGAGACTTTTGGTCGACGAATAGAGAAACTTTTGCTGGAGAAATATGCTACCCTTTGTGGGCAAATAGAAGATGAAAAGGTAGACTCATCAAATAGCATGGCTGATGAAGAGAGTTCTGTAGAAGATGATACAGTCCGCAGCCTTCGTGCAAGCCCGATTAATCCTTGTTCTAAGGACAGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGCAGGGGTGCGTTTGGACGAGTTTTTCTTGCCAGAAAAAGAGCAACTGGTGATTTATTTGCTATTAAGGTTCTAAAAAAGGCAGATATGATTCGTAAAAATTCAGTTCAAGATATTTTGGCTGAGCGAGACATCCTTATATCTATTCGAAATCCTTTTGTGGTCCGTTTTTTCTATTCTTTCACATGTAGAGAAAATCTTTATTTAGTTATGGAGTATTTAAATGGTGGGGATCTCTATTCTATGTTGAGAAACCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCGTTGGAGTATTTGCATACCCAACATATAATTCACAGAGACTTGAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTAACGGACTTTGGACTCTCAAAAGTTGGTCTCATCAACAGCACCGACGATTTATCAGCACCCACATCTTTCGCTAGTGGCTTTTTAGGCGATGATAAACCAAAATCTCGACATGTTTCAAAAAGGGAAGAACGTCAACAACAATCAGTGGTCGGCACTCCAGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTGCAACGGCAGATTGGTGGTCGGTAGGTGTCATACTTTATGAGCTTCTTGTGGGTGTTCCACCTTTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCGAAGTATCCCGAGGAGATAAGCTATGAAGCATATGATTTGATGAATAAATTATTAATCGAAAACCCAGTACAAAGGTTAGGTACAACAGGAGCTTCAGAAGTTAAAAGCCATGCTTTCTTCAAGGACATTAATTGGGATACGCTAGCCAGGCAGAAGGCTATGTTCATACCATCGACTGAAGCTCTTGATACAAGTTATTTTATGAGCCGCTACATTTGGAATCCAGAGGATGAACACTGTGCTGGAGGTAGTGATTTTGATGACATTACTGAATCTTACACCAGTGGTTCAGGAAGCGATTCATATGAAGATGAAGATGAATGTGGTAGTTTAGCGGGGTTCGCTCATTCAGATTCAAACCATCCTGTGTCGCAGTATTCATTTAGTAACTTCTCATTTAAGAATTTGTCTCAACTAGTTACTATCAATTATGATGTGGTGTACAAGAACAAAGAATCGCCCGATGACTCCAATCCATCTGGTTCCTGA | 3582 | 0.4157 | MSSNPPPPENDPPPATPSPVSSRANKLQKTPHILSRRTAASSIDEVADEVTDFAEFEDEENKILEEECVVPQRHFERGESSSSSSSSSILLASSLGLNSIRTRLSPLRHSSSAGAPAFAIKEAAIPVSINNVVKSRSKSSHPRDLGEKVHWNQSKSLKAHHSHLLPVPEANHAAFAEIQSPRFQEILRLTSRRHKRNPDIKSFSHELNSKGVRPYPTWKHRASWHVEEVMVEIRTKFEKLKEEVDSDLGGFAGDLVGTLEKISGSPCEWKEGLEDLLVVARECATMTAAEFWIKCETIVQKLDDKRQEIPVGILKQAHTRLLFILSRCTRLVQFQKESDQKEQDHVLSLHQLSDLGVYSEQILKAAENCSVPPSGHEMAEKQLPKSHGKEQDKLLTKQNQADEHASAATDSVEVTTAKSVESTASSYKMASWRKLPSAAEKKRVCSDTLVKDEHAETLDTSSCQPEHSQTSSRTRKDSWGFWGDQQNLPYDYSMIICRICEVEIPIVSVEEHSRICTIADKCDLKGLTVNERLERVSETIERLLESWTPKSTPKSTDTHGESFEFARVSTSSLHEEFNELSLERNNLSSRCSEDMVDPAPEPDISFVADDLNLSPEITCDTQICSKPDHSAKVSSPGSLTPRSPLITPRTSQIEMLLGGRRHISELESYDQINKLVEIARAVANVNTCDYSSLEYMLERVEDLKYAIQDRKEDALIVETFGRRIEKLLLEKYATLCGQIEDEKVDSSNSMADEESSVEDDTVRSLRASPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNSVQDILAERDILISIRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYIAEVVLALEYLHTQHIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPTSFASGFLGDDKPKSRHVSKREERQQQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGVPPFNAEHPQQIFDNIINRDIQWPKYPEEISYEAYDLMNKLLIENPVQRLGTTGASEVKSHAFFKDINWDTLARQKAMFIPSTEALDTSYFMSRYIWNPEDEHCAGGSDFDDITESYTSGSGSDSYEDEDECGSLAGFAHSDSNHPVSQYSFSNFSFKNLSQLVTINYDVVYKNKESPDDSNPSGS | 1193 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1428g00005 | 1193 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 902 | 914 | IPR008271 | GO:0004672|GO:0006468 | |
| Vivi1428g00005 | 1193 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 1072 | 1174 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Vivi1428g00005 | 1193 | MobiDBLite | consensus disorder prediction | 20 | 37 | - | - | |
| Vivi1428g00005 | 1193 | Gene3D | Transferase(Phosphotransferase) domain 1 | 867 | 1089 | - | - | |
| Vivi1428g00005 | 1193 | MobiDBLite | consensus disorder prediction | 456 | 478 | - | - | |
| Vivi1428g00005 | 1193 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 539 | 1162 | - | - | |
| Vivi1428g00005 | 1193 | MobiDBLite | consensus disorder prediction | 380 | 399 | - | - | |
| Vivi1428g00005 | 1193 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Vivi1428g00005 | 1193 | MobiDBLite | consensus disorder prediction | 952 | 966 | - | - | |
| Vivi1428g00005 | 1193 | FunFam | probable serine/threonine protein kinase IREH1 | 781 | 871 | - | - |
Showing 1 to 10 of 21 entries
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1428g00005 | - | - | gmx:100817975 | 1704.49 |
Showing 1 to 1 of 1 entries