Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi141g00021 ATGATTATTCAACAACTGCAAGATCATAGAGTTGTTCTAGTTAATCAGGATTCGTTTTATCGTGGTTTAACTAAAGATGAGTTGAAACGCGATCATGAGTATAATTTTGATCATCCTGATGCATTCGATACCGAGCAACTTGTAGAAACACTCATCAAACTTAAATCTGGGCAGTCTGTTCAGGTTCCTGTTTATGACTTTAAGCTTCACCAGAGAGCTTCTGATAGATTCCAACAGGTCAATGCATCTGAAGTAGTTATTTTGGAGGGTATATTGGTTTTTCACGAACAACGTGTCCGCGACTTGATGAATATGAAGATATTTGTTGATGCAGATCCTGATGTAAGGCTTTCCCGGAGAATAAGACGAGATACAGTTGAGAGGGGTAGAGATGTGCACTCTGTACTGGAACAGTATGCTAAATTTGTTAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAAAAGTATGCTGACATAATCATACCTCGTGGGGGAGATAATCGTGTAGCAATTGACTTGATCGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGTAAGATATATCCAAATTTGCATGTGATACAGTCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGGGATACAGAAATATCCAAGCATGACTTTGTTTTTTATTCAGATCGGCTAATTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAAAAACAAGTTATCACACCTACAGGATCAATTTATATTGGAGTTGATTTTTGTAAGAAACTGTGTGGAGTATCTGTTATTCGAAGTGGTGAAAGCATGGAAAATGCTTTGCGGGCATGCTGTAAAGGAATAAAAATAGGAAAAATTCTCATCCACCGTGGAGGTGATGAAACCCAGCTTATATATGAGAAGCTTCCTAAAGACATTTCAGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGCACAGGTAACTCTGCGAGCCAAGCAATCGAGCTTCTTATTAAGAAAGGAGTTCCAGAGTCCCAGATAATATTCCTTAACCTTGTCTCTGCTCCTGAGGGAATACAGTATGTATGTAAACGTTTTCCACACATTAAAGTTGTTACTTCGGAGATTGAAGAAGGACTAAATGACCAGTTCCGTGTCGTGCCTGGGTTAGGAGAATTTGGTGACCGATATTTTGGTACAGATGAATCTTAG 1212 0.3952 MIIQQLQDHRVVLVNQDSFYRGLTKDELKRDHEYNFDHPDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDRFQQVNASEVVILEGILVFHEQRVRDLMNMKIFVDADPDVRLSRRIRRDTVERGRDVHSVLEQYAKFVKPAFDDFILPSKKYADIIIPRGGDNRVAIDLIVQHIRTKLGQHNLCKIYPNLHVIQSTFQTRGMHTLIRDTEISKHDFVFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYIGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHRGGDETQLIYEKLPKDISERHVLLMDPVLGTGNSASQAIELLIKKGVPESQIIFLNLVSAPEGIQYVCKRFPHIKVVTSEIEEGLNDQFRVVPGLGEFGDRYFGTDES 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi141g00021 403 PRINTS Uridine kinase signature 114 124 - -
Vivi141g00021 403 PRINTS Uridine kinase signature 150 163 - -
Vivi141g00021 403 PRINTS Uridine kinase signature 12 23 - -
Vivi141g00021 403 PRINTS Uridine kinase signature 128 139 - -
Vivi141g00021 403 PRINTS Uridine kinase signature 57 72 - -
Vivi141g00021 403 PANTHER URIDINE KINASE 4 311 - -
Vivi141g00021 403 FunFam Uridine kinase 186 400 - -
Vivi141g00021 403 SUPERFAMILY PRTase-like 185 401 IPR029057 -
Vivi141g00021 403 Pfam Phosphoribulokinase / Uridine kinase family 11 170 IPR006083 GO:0005524|GO:0016301
Vivi141g00021 403 FunFam Uridine kinase 1 185 - -
Vivi141g00021 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 175 IPR027417 -
Vivi141g00021 403 CDD UMPK 1 182 IPR000764 -
Vivi141g00021 403 Gene3D - 186 400 IPR029057 -
Vivi141g00021 403 Gene3D - 1 185 IPR027417 -
Vivi141g00021 403 ProSiteProfiles UvrC family, homology region profile. 70 171 IPR001162 GO:0009381
Vivi141g00021 403 CDD PRTases_typeI 255 373 IPR000836 -
Vivi141g00021 403 Pfam Uracil phosphoribosyltransferase 200 400 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi141g00021 1 402 PRT Gene Family AT5G40870 82.630 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi141g00021 K00876 - gmx:100816209 737.258