Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi141g00019 ATGATTATTCAACAACTGCAAGATCATAGAGTTGTTCTAGTTAATCAGGATTCGTTTTATCGTGGTTTAACTAAAGATGAGTTGAAACGCGATCATGAGTATAATTTTGATCATCCTGATGCATTTGATACCGAGCAACTTGTAGAAACACTCATCAAACTTAAATCTGGGCAGTCTGTTCAGGTTCCTGTTTATGATTTTAAGCTTCACCAGAGAGCTTCTGATAGATACCAACAGGTCAATGCATCTGAAGTAGTTATTTTGGAGGGTATATTGGTTTTTCACGAACAACGTGTCCGCGACTTGATGAATATGAAGATATTTGTTGATGCAGATCCTGATGTAAGGCTTTCCCGGAGAATAAGACGAGATACGGTTGAGAGGGGTAGAGATGTGCACTCTGTACTGGAACAAGCAAGACTTTAA 426 0.3873 MIIQQLQDHRVVLVNQDSFYRGLTKDELKRDHEYNFDHPDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDRYQQVNASEVVILEGILVFHEQRVRDLMNMKIFVDADPDVRLSRRIRRDTVERGRDVHSVLEQARL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi141g00019 141 Pfam Phosphoribulokinase / Uridine kinase family 11 139 IPR006083 GO:0005524|GO:0016301
Vivi141g00019 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 138 IPR027417 -
Vivi141g00019 141 Gene3D - 1 141 IPR027417 -
Vivi141g00019 141 CDD UMPK 1 138 IPR000764 -
Vivi141g00019 141 PRINTS Uridine kinase signature 57 72 - -
Vivi141g00019 141 PRINTS Uridine kinase signature 128 139 - -
Vivi141g00019 141 PRINTS Uridine kinase signature 114 124 - -
Vivi141g00019 141 PRINTS Uridine kinase signature 12 23 - -
Vivi141g00019 141 PANTHER URIDINE KINASE 4 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi141g00019 1 138 PRT Gene Family AT5G40870 78.986 6.80e-73 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi141g00019 K00876 - vvo:131625227 280.411