Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi141g00018 ATGGACTCTCCCTCCGGCGCGCACTTCTCCGGCTGGCGTCCTTCGTCCATTTCTTCATCTTCTTCTCACAGCGTCTTCCTCATCGGAGTGTCCGGAGGTACTGCATCGGGGAAAACCACTGTGTGTGACATGATTATTCAACAACTGCAAGATCATAGAGTTGTTCTAGTTAATCAGGATTCGTTTTATCGTGGTTTAACTAAAGATGAGTTGAAACGCGATCATGAGTATAATTTTGATCATCCTGATGCATTTGATACCGAGCAACTTGTAGAAACACTCATCAAACTTAAATCTGGGCAGTCTGTTCAGGTTCCTGTTTATGATTTTAAGCTTCACCAGAGAGCTTCTGATAGATACCAACAGGTCAATGCATCTGAAGTAGTTATTTTGGAGGGTATATTGGTTTTTCACGAACAACGTGTCCGCGACTTGATGAATATGAAGATATTTGTTGATGCAGATCCTGATGTAAGGCTTTCCCGGAGAATAAGACGAGATACGGTTGAGAGGGGTAGAGATGTGCACTCTGTACTGGAACAAGCAAGACTTTAA 555 0.4306 MDSPSGAHFSGWRPSSISSSSSHSVFLIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQDSFYRGLTKDELKRDHEYNFDHPDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRASDRYQQVNASEVVILEGILVFHEQRVRDLMNMKIFVDADPDVRLSRRIRRDTVERGRDVHSVLEQARL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi141g00018 184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 181 IPR027417 -
Vivi141g00018 184 MobiDBLite consensus disorder prediction 1 20 - -
Vivi141g00018 184 Gene3D - 25 184 IPR027417 -
Vivi141g00018 184 FunFam Uridine kinase 22 183 - -
Vivi141g00018 184 CDD UMPK 27 181 IPR000764 -
Vivi141g00018 184 PRINTS Uridine kinase signature 25 42 - -
Vivi141g00018 184 PRINTS Uridine kinase signature 157 167 - -
Vivi141g00018 184 PRINTS Uridine kinase signature 100 115 - -
Vivi141g00018 184 PRINTS Uridine kinase signature 55 66 - -
Vivi141g00018 184 PRINTS Uridine kinase signature 171 182 - -
Vivi141g00018 184 PANTHER URIDINE KINASE 21 181 - -
Vivi141g00018 184 Pfam Phosphoribulokinase / Uridine kinase family 27 182 IPR006083 GO:0005524|GO:0016301
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi141g00018 1 181 PRT Gene Family AT5G40870 64.734 4.20e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi141g00018 K00876 - vvo:131625227 357.066