Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1418g00001 ATGGATGACTACAAGTGGGAATTAGGGACATGCTTTGCTATAGAATGTGATTTCAAAGATTGTATTTGGACATATGCCATACACTCTGATACATGGCAGCTTAGAAATATTATTGATAACCATAACCGTAGTAGAGATCACAAGGTCAATTTCCTCACATCCAAGTGGCTTAGTAGTAAGATACAAAACAATGTGAGGGAGAATCCTAGTTTAAAACTGCCTAATATCATGGAGAAGACCCAACAAAAATGGAATGTGGAGATTAACAAAACACTTGTATACAGAGCAAAGACAATGGCTATTGATATTGTTGATGGGTCTTTTATGGAGCAGTATAAAAGAATTCATGATTATGCACATGAATTTTTGAGGTCAAATCATGGTTTGGATGGCTGCTTTTTGAAAGGTTATTATGGTGGACAAATACTTGCAACAATTTCAAGGGACCCAAATGACCAAATGTTTCCAATTACATTTTCTGTTATGGAAGGTGAAACCAAGGATTCATGGAGTTGGTTCCAAGAATTGTTGATATCTGACCTAGGAGGTACAAGATTATGCAAGACATACACATTCGTTAGTGATCAACAAAAGCTCTTGATGAATTGCTCCTTCAAGTTGACCAAAGATTTTGTGTTAGATATATTGCATATATACAACAACTTTAGGAACAAATATCTACGCATTAAGCTCAAAGAACTTATGTGGAAAGCAACTACAACCAATTATGTCAATGCATTTGAAAAGGTCATGCTTGAAATGAAAGATTTGTTCACCACAAGTAAAGAAGTGGTAATAGATGCAACAGATAAGGGAAACATCACACGACTTATAAACCATTCTTGCATGCCAAACTGCTTTGCAAGGATTGTGAGTTTGAGTGATGAGGAAAGCGTGATCGTTCTTATTACAAGTTATCCATCATTATTCCAGCCTATAGGAATTAATACAGATATATGA 960 0.3542 MDDYKWELGTCFAIECDFKDCIWTYAIHSDTWQLRNIIDNHNRSRDHKVNFLTSKWLSSKIQNNVRENPSLKLPNIMEKTQQKWNVEINKTLVYRAKTMAIDIVDGSFMEQYKRIHDYAHEFLRSNHGLDGCFLKGYYGGQILATISRDPNDQMFPITFSVMEGETKDSWSWFQELLISDLGGTRLCKTYTFVSDQQKLLMNCSFKLTKDFVLDILHIYNNFRNKYLRIKLKELMWKATTTNYVNAFEKVMLEMKDLFTTSKEVVIDATDKGNITRLINHSCMPNCFARIVSLSDEESVIVLITSYPSLFQPIGINTDI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1418g00001 319 Gene3D SET domain 233 306 IPR046341 -
Vivi1418g00001 319 Pfam SET domain 261 293 IPR001214 GO:0005515
Vivi1418g00001 319 SUPERFAMILY SET domain 254 296 IPR046341 -
Vivi1418g00001 319 PANTHER POLYPROTEIN, PUTATIVE-RELATED 33 244 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi1418g00001 SET 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1418g00001 - - vvo:131641676 662.529