Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1417g00006 ATGGGTGCTTGCTGGAGTAATAGGGTTAAGTCTGTGAGTCCTTCAAACACAGGGTTTACTTCTAGAAGTGTTAGCAGAAGTGGCCATGACATCAGCTCAACTAGCAGGAACTCGTCAGCGTCGATATCGGTTGCTTCTCGAAGTGAGGGTGAGATATTGCAATCTTCGAATTTGAAAAGCTTCAGCTACAATGAGGTGAGAGCTGCCACGAGGAATTTCCGGCCGGATAGTGTCTTGGGGGAGGGTGGTTTTGGTTCGGTTTTTAAGGGATGGATTGATGAACATTCACATGCTGCAACCAAACCTGGATTGGGGATTATTGTTGCTGTGAAGAGGCTTAATCAAGAGGGCTTTCAGGGTCACAGAGAATGGTTGGCCGAAATCAATTATCTCGGGCAACTTCAGCATCCTAATCTTGTCAAACTAATAGGATACTGCTTTGAGGACGAACACCGGCTTCTGGTTTACGAGTTTATGCCGAAGGGAAGCATGGAGAATCATCTTTTTAGACGTGGTTCTTATTTTCAACCATTCTCTTGGAGTTTGCGAATGAAAATAGCTCTCGGGGCTGCTAAAGGTCTCGCTTTCCTCCATAGTACAGAACCTAAAGTCATATACCGTGACTTCAAAACTTCGAATATACTACTGGATTCTAACTATGATGCCAAACTTTCTGATTTTGGATTGGCAAGAGATGGGCCAACTGGTGATAAAAGTCACGTCTCTACTCGGGTCATGGGAACCCGTGGTTATGCCGCACCCGAGTATCTAGCAACAGGCCATCTTACTGCGAAGAGTGATGTATATAGTTTTGGAGTAGTTCTTCTCGAAATGATATCAGGAAGACGAGCCATAGACAAGAACCTACCATCCGGAGAACACAACCTAGTCGAATGGGCCAAGCCTTACCTATCCAACAAACGCAGAGTTTTTCGCGTGATGGATCCACGTCTCGAAGGTCAATATTCACATAGCAAAGCTCATGCCGCAGCTGCCCTTGCTTCACAATGTCTATCAATAGAACCTAGAATCAGGCCCAATATGGACGAGGTCGTGAAAACATTGGAGCAGCTTCAAGAACCAAAAGACACACATAAGAAAGGTTCCGATCACCGCGTCCGCAATACCGGCCTCGGCCACAACGCTTCCGGCAAAGGTAATGCAGATGCTTCTAGAAAGGCTTCTGCTTATCCTAGACCTTCTGCTTCTCTCCTTAATGCTTGA 1224 0.46 MGACWSNRVKSVSPSNTGFTSRSVSRSGHDISSTSRNSSASISVASRSEGEILQSSNLKSFSYNEVRAATRNFRPDSVLGEGGFGSVFKGWIDEHSHAATKPGLGIIVAVKRLNQEGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDSNYDAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNLPSGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHSKAHAAAALASQCLSIEPRIRPNMDEVVKTLEQLQEPKDTHKKGSDHRVRNTGLGHNASGKGNADASRKASAYPRPSASLLNA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1417g00006 407 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1417g00006 407 FunFam Probable serine/threonine-protein kinase PBL8 159 374 - -
Vivi1417g00006 407 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1417g00006 407 MobiDBLite consensus disorder prediction 8 42 - -
Vivi1417g00006 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Vivi1417g00006 407 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Vivi1417g00006 407 SUPERFAMILY Protein kinase-like (PK-like) 41 355 IPR011009 -
Vivi1417g00006 407 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Vivi1417g00006 407 MobiDBLite consensus disorder prediction 358 374 - -
Vivi1417g00006 407 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Vivi1417g00006 407 MobiDBLite consensus disorder prediction 358 407 - -
Vivi1417g00006 407 Gene3D Transferase(Phosphotransferase) domain 1 159 380 - -
Vivi1417g00006 407 PANTHER OS01G0588500 PROTEIN-RELATED 37 359 - -
Vivi1417g00006 407 MobiDBLite consensus disorder prediction 1 42 - -
Vivi1417g00006 407 CDD STKc_IRAK 79 358 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1417g00006 27 355 Glycoside Hydrolase AT3G07070 47.447 4.51e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi1417g00006 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1417g00006 - - gmx:100793817 707.212