Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1411g00004 ATGGGTTCTGGTTTTTGGTTTAAAGCAATAATTAGTTTAAGGAATAGGAAGTCAAGAGATCGAAGATCAAAGAAAGCAAAGGGTACTTTAGCTCAGGAGAAGTTGAAGTCGAACAAGTCTCCAGGAAATGAGTCTACTGATTTAGCAAATGGCAACCAAAATGAAACTACTGCTGCAACAAGGATCCAGACTGCATTCCGGGCTTATAAGGCTAGGAAAGCTCTACGACGATTGAAAGGTTTCACGAAACTGAAGAATTTAACACAAGGTTACTCTATTCAAAAGCAAGCCAGTACAACTATAACATACCTTCATTCATGGAGCAAAATACAGGGTGAGATTAGAGCTCGTCGGATATGTATGGTGACAGAAGAAAGGATCAAGCGGAAGAAACAAGAGTCTCAACTAAAACTCGAAGAAAAGCTTCATGATTTCGAGGTTGAATGGTCCGGCGGCCCTGAAACCGCGGAGGAAACCCTTGGTAGGATACATCAGAGAGGAGAAGCAGCAGTGAAGCGCGAAAGAGCCATGGCCTATGCTTTTTCTCATCAGTGGAGAGCAAACTCCAGTCAGAGCCAAGTACTAGGCAGTTACGAGCTCGGCAGAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATCGCCGCCCGTCCATGGGAAAGCCGCGTCGCTACCATTAGCCCGAAGAAAACTCCAAATAAACAATCCTTCAAGGCTCAAAAGGATAAAAACACATCAACATCTAAAACTCCGGTTTCGGTAACACCTCCTTCCTCCAATACTAAAGGAACTCCTCCTCCTAAAGGGAGTACCAAAGGTAGGAGATTGTCTTTTCCTACCACAGAGAAAGAGAAAACTCTGGTTGAAGGAGTGAAGTGA 879 0.4471 MGSGFWFKAIISLRNRKSRDRRSKKAKGTLAQEKLKSNKSPGNESTDLANGNQNETTAATRIQTAFRAYKARKALRRLKGFTKLKNLTQGYSIQKQASTTITYLHSWSKIQGEIRARRICMVTEERIKRKKQESQLKLEEKLHDFEVEWSGGPETAEETLGRIHQRGEAAVKRERAMAYAFSHQWRANSSQSQVLGSYELGRANWGWSWKERWIAARPWESRVATISPKKTPNKQSFKAQKDKNTSTSKTPVSVTPPSSNTKGTPPPKGSTKGRRLSFPTTEKEKTLVEGVK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1411g00004 292 MobiDBLite consensus disorder prediction 226 267 - -
Vivi1411g00004 292 ProSiteProfiles IQ motif profile. 55 83 IPR000048 GO:0005515
Vivi1411g00004 292 MobiDBLite consensus disorder prediction 33 56 - -
Vivi1411g00004 292 MobiDBLite consensus disorder prediction 277 292 - -
Vivi1411g00004 292 Pfam IQ calmodulin-binding motif 58 76 IPR000048 GO:0005515
Vivi1411g00004 292 MobiDBLite consensus disorder prediction 225 292 - -
Vivi1411g00004 292 PANTHER IQ-DOMAIN 5-RELATED 1 261 - -
Vivi1411g00004 292 MobiDBLite consensus disorder prediction 17 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1411g00004 1 279 IQD Protein Family AT2G33990 52.688 1.93e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1411g00004 - - gmx:100813685 380.948