LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1407g00001	ATGGAGGAGGATCATGGAAAGGCAATGGAGGAGATTTTGAGAGGGTGTGAGTTTGCCAACCAGCTCCAACAATTACTGCTAAACAATAATAGTAATGATTTTACAGAAACAACTTCATTTGTTCAATATCTTGTCAACAACATCATCAATTCCTTTAGCAACGTTCTTTTTCTTTTGGACAAACATGATTTATCCTGCAATTCCATTGCTCCTGTAATAAGACCTGTCGCCGAATTGGAAGAAAGTCGCAAGACTACTTCTTCTGCTACCAGAGCTCCTTACAAAAGAAGAAACACTACACGGGAGAAGGTGACAGAAACTCCCTTAGATGATGATGGTCATCAATGGAGAAAGTATGGCCAGAAAAAGATCAACAATTCTCAATACTCAAGGAACTACTACAGGTGTACTCACAAGTATGATCAAAGATGTCTAACAACAAAACAAGTCGAGAGAATTCAACAAAAACCTCCCTTATATAAAACCACCTACTATGGCCACCACACTTGTGGAAACTTGCCCAACCCTCACATCATACATGACCCTAGTGACACTAATTCCTCCGTATTGCTTAGCTTTAACAACACATTCCCAGTTCCAACAAAACAAGACTGTCCCTTTTTATCATCATCTTCTCCTTCCTCACATGATTTAGTGAATAATGACATACTCTTAGACGACAATAATTGCATGCTCTTCACTGATACGTCTTTTGATGATTCTAACTCTACAAGTCATGTTCCTACTCTACCATCAACATTTGAAAATGATCACAAAAATATGAGGCAGTGTGGTTTCTTGTATGATTTTGGGGAGTTTGATGATGATTTCTTTCTCCCTTTTGATGGGTTTTGA	855	0.3836	MEEDHGKAMEEILRGCEFANQLQQLLLNNNSNDFTETTSFVQYLVNNIINSFSNVLFLLDKHDLSCNSIAPVIRPVAELEESRKTTSSATRAPYKRRNTTREKVTETPLDDDGHQWRKYGQKKINNSQYSRNYYRCTHKYDQRCLTTKQVERIQQKPPLYKTTYYGHHTCGNLPNPHIIHDPSDTNSSVLLSFNNTFPVPTKQDCPFLSSSSPSSHDLVNNDILLDDNNCMLFTDTSFDDSNSTSHVPTLPSTFENDHKNMRQCGFLYDFGEFDDDFFLPFDGF	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1407g00001	284	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	10	183	IPR044810	GO:0003700
	Vivi1407g00001	284	SUPERFAMILY	WRKY DNA-binding domain	105	171	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Vivi1407g00001	284	MobiDBLite	consensus disorder prediction	95	116	-	-
	Vivi1407g00001	284	SMART	WRKY_cls	110	172	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Vivi1407g00001	284	ProSiteProfiles	WRKY domain profile.	105	168	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Vivi1407g00001	284	Pfam	WRKY DNA -binding domain	111	170	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Vivi1407g00001	284	Gene3D	WRKY domain	95	174	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Vivi1407g00001	284	MobiDBLite	consensus disorder prediction	80	116	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1407g00001	4	228	WRKY Transcription Factor Family	AT1G66550	34.025	3.76e-29	109

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Vivi1407g00001		WRKY	4.5e-22	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1407g00001	-		-	vvo:131639289	494.582