Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1403g00002 ATGATGAAAAACAAAGAACAAACTCTCATCTTCCCTTCTCACACCCCCTTCTCTGAAGACCACACCCTCCCCCTCTCCCACCTCGACACCGATCGCAACCTCCACTTAACCATCCGCTACCTCCGCGCTTACACCGCCACAACCACCACAACAACCACCGCCCACCATAACAACCCCTTCCACGTCATCTCCTCCTCCCTCTCACAAACACTCCCTCACTACTACCCACTCGCCGCCACACTCCGCCACCGCAAACACCCTAACAACCGCCTCGAACTCTTCTGCACTGCCAACCAAGGCATCCCTCTTATCCACACTACCGTAGACTTCACTCTCGACTCCGTAAACTACCTCGATGACCCATCTTCGCCTTTCCTCGAACACCTGGTGCCCGACCCAGAACCCGAAGAGGGAATGGAGCACCCATGTATGCTTCAGCTAACGGTTTTCAAGTGCGGCGGGTTCACTCTCGGTGCAGCGATTCATCACTCGCTGTGCGATGGAATGGGTGGGACTCTGTTTTTTAACTCGGTGGCTGAGTTGGCTCGTGGAGCGACTCGGGTTACGGTGGAGCCTATATGGGATCGAGAGAAGTTGTTGGGTCCAAGAGATCCACCTCGAGTGGATTCACCTTTGATAAAAGAGTTTCTGAGTTTGGACAAAGAATTTGCACCGTATAAGGAGAATGTTGGTCGTGTTGTACGAGAATGTTTTCATGTGAGGGATGAGTGCTTAGAGACTTTCAAACGATCATTGTTTGATCAATGTGGATTCAAATTCACCACTTTTGAAGCTCTTGGTGCTTACATTTGGAGATCCAAGGTAAGGGCTTCAGGAGTGGAGGACAATGAGAAGGTTAAATTTGCATACTCAATTAATATAAGAAGATTAGTAAAGCCAGCACTACCTAGTGGATATTGGGGAAATGGTTGTGTTCCAATGTATGTTCAATTGAGTGCCAAAGATTTGATAGAGAGGCCAATTTGGGAAACAGCAGAGCTAATAAGAAAGAGTAAAAGCAATGTTACTGATGAGTATGTTCGTTCCTTCATTGATTATCAAGAGCTGCATTTCGGTGATGGGATTACAGTAGGGAAATGGGTGAGCGGGTTCACTGATTGGAGACACTTGGGTCATTCTACTGTTGATTTCGGGTGGGGTGGTCCTGTTACTGTTTTGCCACTTGGGAGAAACTTGCTTGGGAGTGTTGAACCTTGCTTCTTTTTGCCGTATTCGACTGCTAGTGCAGAGAAAAAGGACGGGTTTAAGGTTCTGGTGACTTTGAATGAGGCAGCTTTGTCTGGTTTTAGGGAAGACATGCAAGTATTTGCCGGGAGCCAAGAGGCGACGCCCTTGCCGCGCATTTGA 1368 0.4839 MMKNKEQTLIFPSHTPFSEDHTLPLSHLDTDRNLHLTIRYLRAYTATTTTTTTAHHNNPFHVISSSLSQTLPHYYPLAATLRHRKHPNNRLELFCTANQGIPLIHTTVDFTLDSVNYLDDPSSPFLEHLVPDPEPEEGMEHPCMLQLTVFKCGGFTLGAAIHHSLCDGMGGTLFFNSVAELARGATRVTVEPIWDREKLLGPRDPPRVDSPLIKEFLSLDKEFAPYKENVGRVVRECFHVRDECLETFKRSLFDQCGFKFTTFEALGAYIWRSKVRASGVEDNEKVKFAYSINIRRLVKPALPSGYWGNGCVPMYVQLSAKDLIERPIWETAELIRKSKSNVTDEYVRSFIDYQELHFGDGITVGKWVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASAEKKDGFKVLVTLNEAALSGFREDMQVFAGSQEATPLPRI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1403g00002 455 PANTHER ACYL TRANSFERASE 4 3 443 - -
Vivi1403g00002 455 Gene3D - 2 215 IPR023213 -
Vivi1403g00002 455 Pfam Transferase family 5 441 - -
Vivi1403g00002 455 Gene3D - 221 439 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1403g00002 61 396 Monolignol Biosynthesis Gene Families AT5G48930 28.818 5.81e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1403g00002 - - gmx:100817021 703.36