Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi139g00001 ATGTTTTTGAAGGATAACAATACTAACAACACTAACGGCTACCACCATCATCAACCACCACCTCCACCACCAGAAATGGTGCATAATCACAGCAACAGAGATAGAGCCCGTCACGGCACTCGCCGCTCACGTGTTTCCACTTCTAATTCCCGTGTTAGGGTTTCCGATGCCGAACAACCTCAACAGCCTACTAATCGATCTCCTTGCACCGATTATGATATGGCGTATTTTCATTCCTATGCTCACCTCGGTATTCATCAAGAAATGATCAAGGATCGTGTGCGGACTGATACTTATAGGGAAGCAATCATGCGGCATCAGAGTCTTATAGCTGGCAAAGTCGTAGTTGATGTTGGTTGCGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCTCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTGTCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGGAGCGTTATTACTGCCAGAGATCGCTGGCTCAAACCCGGTGGTCTTATTCTTCCTTCGAGTGCATCGTTGTACATGGCTCCTGTCACACATACGGACAGATACAGTGACAGCGTCGACTTTTGGCGCAATGTTTATGGAATTGACATGTCTGCCATGTTATCATTAGCAAAACAATGTGCATTTGAGGAACCTTCTGTGGAGACAATAACCGGTGAAAATATTTTGACATGGCCACATATGGTTAAATATATTGATAGCTATTCCGTTACCATCAATGAGTTAGAAACTGTAACGTCGAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTCAATGTGCCTAAGGTAGAGTCATCAACATCAGTTATCGAGAATAATCAACTGAACGGTAGTTTGAGGAAAAAGCGAACAAATCCTAGTGAAGCACTGGTCCTATCCACTGCACCTGAGGATCCTCCAACACATTGGCAGCAGACATTGATATACTTCTATGATCCTATTGACCTGGAGCAAGATCAATTAATCGAAGGTTTAGTAACATTGACACAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAGTATACTTCGGGTAATCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1260 0.4254 MFLKDNNTNNTNGYHHHQPPPPPPEMVHNHSNRDRARHGTRRSRVSTSNSRVRVSDAEQPQQPTNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTDTYREAIMRHQSLIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSASLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHMVKYIDSYSVTINELETVTSKFKFNSMMRAPLHGFAFWFDVEFNVPKVESSTSVIENNQLNGSLRKKRTNPSEALVLSTAPEDPPTHWQQTLIYFYDPIDLEQDQLIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi139g00001 419 MobiDBLite consensus disorder prediction 1 69 - -
Vivi139g00001 419 MobiDBLite consensus disorder prediction 1 15 - -
Vivi139g00001 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 409 IPR029063 -
Vivi139g00001 419 Gene3D - 217 418 - -
Vivi139g00001 419 FunFam Protein arginine N-methyltransferase 6 217 417 - -
Vivi139g00001 419 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 38 409 IPR025799 GO:0016274|GO:0018216
Vivi139g00001 419 CDD AdoMet_MTases 115 214 - -
Vivi139g00001 419 Pfam Ribosomal protein L11 methyltransferase (PrmA) 111 185 - -
Vivi139g00001 419 FunFam Protein arginine N-methyltransferase 6 69 215 - -
Vivi139g00001 419 Gene3D Vaccinia Virus protein VP39 70 215 IPR029063 -
Vivi139g00001 419 MobiDBLite consensus disorder prediction 45 69 - -
Vivi139g00001 419 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 73 402 IPR025799 GO:0016274|GO:0018216
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi139g00001 76 385 C2H2 Transcription Factor Family AT3G12270 39.385 1.29e-66 221