Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1397g00003 ATGGAGGAGTTTGGTTGGAGATGGAAGTTGGTTAACGAAAGTTTGTGTGTCGTAATGGATAGCTTAAACATTTTGATAGATTCAGGAGATAGTCAAAGGGAAGATGTAGAAGTTGATCACGGTGATGGTGATGGTGATGATTCACGTTGGGTTCCCGAAATTGGAATATGGAGGATTAGGTCATCGAAAAAGGGAGATGATGGAGAGCTCAACTACCTAATACTTTCATGTTCAAGAGGGGGATCAACTGTTTCAAAAATTTCATGCACGTTAAAGACACTACCATCTCGAGCGAAAAATTGTCCTGCCAAGATTTGTGTTAAAATGAAAGAAGATGGTTTGTGGTACATTACACAATTTGAATCTATCCATTCTCATGAAACTCGTCCTACGAAAGCAAGATTGTTCAAGGCCAACAAGAAAATGAACTTACACGTGAGAAGAACAATCCAAATCAATGATGATGCGGGAGTAAGGATCAACAAGACTTTTCAATCACTAGTTAAAGATGCAGGCGGTCATGAAAATATTCCGTTTTGTGAAAAGGACGTGAGGAATTATATTAACAAAGAACGTCGTGCAATTGGAAAAGAAGGTGATGGTAAGGCTTTGATAAGTTATTTTTGTAAAATGAGGGAACAAGATACAAATTTCTTCTATGACATAGATTTGGATGATGATTTTCATGTGAGGAATGTATTTTGGGCGGATGCAAGAAGTAGAGACGCTTACGAATATTTTGGCGATGTTGTAACTTTCGATACAACATACTTGACTAACAAGTATGACATGCCTTTTGCTGCATTTGTATGTGTGAATCACCATGGTCAATCAACATTACTTGGTTGTGGATTACTATCAGGTGAAGACACAGGTTCTTTTGTGTGGCTTTTCAAGTCATGGCTTCGTTGTATGTTAGAAAAACCACCTATGGGTATTGTGACCGATCAATGTAAGGCTATGAAAAATGCTATTGAGTTAGTCTTCCCTACAACTCGTCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTCCAGAAAAACTTAGCGGATATGGTGAATACAAAAGGATCAAGTATGCAATGAAAGAAGCAGTCTATGATACATTCACAACAGATGGTTTTGAACAAAAATGGAGTTTGTTCATAGAAAAATTTAATCTCCAAGAGAATGATTGGTTGGGAGGGTTGTATATGGAGCGTCATCGGTGGGCACCAACTTTGTTAAGGAAATATTTTTGGGCTGGTATGTCTACTACGCAGCGTAGTGAGAGCATACATGCTTTCTTTGATGGATATATAAATTCTACAACAAGTCTAAATCAATTTGTGAAACAATATGATAACGCTCTTAGAAGTCGGGCAGAAAAGGAATTTGAAGCTGATTTTAATTCGATGGATACAACAATTCCATGTGGGTCAAACTCGACCATTGAGAAGCAATTCCAAAATAAGTATACTCATGCCAAATTCAAGGAAATTCAAGTGGAATTCAGATCTAAAATGAATTGTTCTACCTCATTGAAAGACGTGGAAGGTTGCTTTGCTACGTATCATGTGTTGGAGGAGATATTAGTTGGAGAGATACGTAAAGAGCGAGTCTTAAAAGTTGTGCTTAACAAGGAAAACCATGATTTCAAATGTGAATGCTCATTGTTTGAGTTTAGAGGTATTGTGTGCCGCCATGTGTTATCCGTGTGTAGTCAGGAGAGGATTACAAGCCTTCCAGATAAGTTTGACAAATTATGCAAACACTTTTATGAGGTTGCTGAAGTAGCTGCTGATTCAGATGAGGCTACTGATGACCTCCATGAAACATTAAATTTGTTTAGCTCCAATATGTCCATAAAGGATAGTGCAGTTGTTGAAGAAAATCTCAATGAGGATTCCAATCCAATCAATAGTAATCACATTCGTAGCCCAAAACATGTCAAGCGCAAAGGTCGTCCTCCATCTAAAAGAAAAATATCTGTCTCTGACACGATTGTTAAGAGGTCAAGGAAGCAAACCAAAAAAAGTGATCACATTGAGCTTACTACAGAGTGCAATATTGGAATGGTGGGAAGTCAGCTCGGAAGTAACATTTGTGTAGAATCATCTCTTGAGGTTGATAATGGAGGACATTGCTTAGATTCAAATATCGTGGTTTGTGTCCATTATAAGATTGTTGGAGGTAATATGTCATTCATGGATCTTTTGACAACATGTGAAACACCTTTGGTGGGTTCATCTCAAGTTTGTACAAATTGA 2250 0.3756 MEEFGWRWKLVNESLCVVMDSLNILIDSGDSQREDVEVDHGDGDGDDSRWVPEIGIWRIRSSKKGDDGELNYLILSCSRGGSTVSKISCTLKTLPSRAKNCPAKICVKMKEDGLWYITQFESIHSHETRPTKARLFKANKKMNLHVRRTIQINDDAGVRINKTFQSLVKDAGGHENIPFCEKDVRNYINKERRAIGKEGDGKALISYFCKMREQDTNFFYDIDLDDDFHVRNVFWADARSRDAYEYFGDVVTFDTTYLTNKYDMPFAAFVCVNHHGQSTLLGCGLLSGEDTGSFVWLFKSWLRCMLEKPPMGIVTDQCKAMKNAIELVFPTTRHRWCLWHIMKKIPEKLSGYGEYKRIKYAMKEAVYDTFTTDGFEQKWSLFIEKFNLQENDWLGGLYMERHRWAPTLLRKYFWAGMSTTQRSESIHAFFDGYINSTTSLNQFVKQYDNALRSRAEKEFEADFNSMDTTIPCGSNSTIEKQFQNKYTHAKFKEIQVEFRSKMNCSTSLKDVEGCFATYHVLEEILVGEIRKERVLKVVLNKENHDFKCECSLFEFRGIVCRHVLSVCSQERITSLPDKFDKLCKHFYEVAEVAADSDEATDDLHETLNLFSSNMSIKDSAVVEENLNEDSNPINSNHIRSPKHVKRKGRPPSKRKISVSDTIVKRSRKQTKKSDHIELTTECNIGMVGSQLGSNICVESSLEVDNGGHCLDSNIVVCVHYKIVGGNMSFMDLLTTCETPLVGSSQVCTN 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1397g00003 749 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Vivi1397g00003 749 Pfam SWIM zinc finger 548 568 IPR007527 GO:0008270
Vivi1397g00003 749 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 607 IPR031052 GO:0006355
Vivi1397g00003 749 Pfam MULE transposase domain 250 344 IPR018289 -
Vivi1397g00003 749 Pfam FAR1 DNA-binding domain 61 128 IPR004330 -
Vivi1397g00003 749 SMART 26again6 546 573 IPR006564 GO:0008270
Vivi1397g00003 749 MobiDBLite consensus disorder prediction 627 657 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1397g00003 MULE 5.5e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1397g00003 - - vvo:131641577 1474.53