Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1397g00002 ATGGATAGCTTAAACATTTTGATAGATTCAGGAGATAGTCAAAGGGAAGATGTAGAAGTTGATCACGGTGATGGTGATGGTGATGATTCACGTTGGGTTCCCGAAATTGGAATGTGCTTTTCTTGTGTGGAGGAAGTTAAAACATATTATCAGCAGTATGCTTTGAAAAAGGGTTTCGGATGGAGGATTAGGTCATCGAAAAAGGGAGATGATGGAGAGCTCAACTACCTAATACTTTCATGTTCAAGAGGGGGATCAACTGTTTCAAAAATTTCATGCACGTTAAAGACACTACCATCTCGAGCGAAAAATTGTCCTGCCAAGATTTGTGTTAAAATGAAAGAAGATGGTTTGTGGTACATTACACAATTTGAATCTATCCATTCTCATGAAACTCGTCCTACGAAAGCAAGATTGTTCAAGGCCAACAAGAAAATGAACTTACACGTGAGAAGAACAATCCAAATCAATGATGATGCGGGAGTAAGGATCAACAAGACTTTTCAATCACTAGTTAAAGATGCAGGCGGTCATGAAAATATTCCGTTTTGTGAAAAGGACGTGAGGAATTATATTAACAAAGAACGTCGTGCAATTGGAAAAGAAGGTGATGGTAAGGCTTTGATAAGTTATTTTTGTAAAATGAGGGAACAAAATACAAATTTCTTCTATGACATAGATTTGGATGATGATTTTCATGTGAGGAATGTATTTTGGGCGGATGCAAGAAGTAGAGACGCTTACGAATATTTTGGCGATGTTGTAACTTTCGATACAACATACTTGACTAACAAGTATGACATGCCTTTTGCTGCATTTGTATGTGTGAATCACCATGGTCAATCAACATTACTTGGTTGTGGATTACTATCAGGTGAAGACACAGGTTCTTTTGTGTGGCTTTTCAAGTCATGGCTTCGTTGTATGTTAGAAAAACCACCTATGGGTATTGTGACCGATCAATGTAAGGCTATGAAAAATGCTATTGAGTTAGTCTTCCCTACAACTCGTCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTCCAGAAAAACTTAGCGGATATGGTGAATACAAAAGGATCAAGTATGCAATGAAAGAAGCAGTCTATGATACATTCACAACAGATGGTTTTGAACAAAAATGGAGTTTGTTCATAGAAAAATTTAATCTCCAAGAGAATGATTGGTTGGGAGGGTTGTATATGGAGCGTCATCGGTGGGCACCAACTTTGTTAAGGAAATATTTTTGGGCTGGTATGTCTACTACGCAGCGTAGTGAGAGCATACATGCTTTCTTTGATGGATATATAAATTCTACAACAAGTCTAAATCAATTTGTGAAACAATATGATAACGCTCTTAGAAGTCGGGCAGAAAAGGAATTTGAAGCTGATTTTAATTCGATGGATACAACAATTCCATGTGGGTCAAACTCGACCATTGAGAAGCAATTCCAAAATAAGTATACTCATGCCAAATTCAAGGAAATTCAAGTGGAATTCAGATCTAAAATGAATTGTTCTACCTCATTGAAAGACGTGGAAGGTTGCTTTGCTACGTATCATGTGTTGGAGGAGATATTAGTTGGAGAGATACGTAAAGAGCGAGTCTTAAAAGTTGTGCTTAACAAGGAAAACCATGATTTCAAATGTGAATGCTCATTGTTTGAGTTTAGAGGTATTGTGTGCCGCCATGTGTTATCCGTGTGTAGTCAGGAGAGGATTACAAGCCTTCCAGATAAGTTTGACAAATTATGCAAACACTTTTATGAGGTTGCTGAAGTAGCTGCTGATTCAGATGAGGCTACTGATGACCTCCATGAAACATTAAATTTGTTTAGCTCCAATATGTCCATAAAGGATAGTGCAGTTGTTGAAGAAAATCTCAATGAGGATTCCAATCCAATCAATAGTAATCACATTCGTAGCCCAAAACATGTCAAGCGCAAAGGTCGTCCTCCATCTAAAAGAAAAATATCTGTCTCTGACACGATTGTTAAGAGGTCAAGGAAGCAAACCAAAAAAAGTGATCACATTGAGCTTACTACAGAGTGCAATATTGGAATGGTGGGAAGTCAGCTCGGAAGTAACATTTGTGTAGAATCATCTCTTGAGGTTGATAATGGAGGACATTGCTTAGATTCAAATATCGTGGTTTGTGTCCATTATAAGATTGTTGGAGGTAATATGTCATTCATGGATCTTTTGACAACATGTGAAACACCTTTGGTGGGTTCATCTCAAGTTTGTACAAATTGA 2262 0.374 MDSLNILIDSGDSQREDVEVDHGDGDGDDSRWVPEIGMCFSCVEEVKTYYQQYALKKGFGWRIRSSKKGDDGELNYLILSCSRGGSTVSKISCTLKTLPSRAKNCPAKICVKMKEDGLWYITQFESIHSHETRPTKARLFKANKKMNLHVRRTIQINDDAGVRINKTFQSLVKDAGGHENIPFCEKDVRNYINKERRAIGKEGDGKALISYFCKMREQNTNFFYDIDLDDDFHVRNVFWADARSRDAYEYFGDVVTFDTTYLTNKYDMPFAAFVCVNHHGQSTLLGCGLLSGEDTGSFVWLFKSWLRCMLEKPPMGIVTDQCKAMKNAIELVFPTTRHRWCLWHIMKKIPEKLSGYGEYKRIKYAMKEAVYDTFTTDGFEQKWSLFIEKFNLQENDWLGGLYMERHRWAPTLLRKYFWAGMSTTQRSESIHAFFDGYINSTTSLNQFVKQYDNALRSRAEKEFEADFNSMDTTIPCGSNSTIEKQFQNKYTHAKFKEIQVEFRSKMNCSTSLKDVEGCFATYHVLEEILVGEIRKERVLKVVLNKENHDFKCECSLFEFRGIVCRHVLSVCSQERITSLPDKFDKLCKHFYEVAEVAADSDEATDDLHETLNLFSSNMSIKDSAVVEENLNEDSNPINSNHIRSPKHVKRKGRPPSKRKISVSDTIVKRSRKQTKKSDHIELTTECNIGMVGSQLGSNICVESSLEVDNGGHCLDSNIVVCVHYKIVGGNMSFMDLLTTCETPLVGSSQVCTN 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1397g00002 753 MobiDBLite consensus disorder prediction 12 29 - -
Vivi1397g00002 753 SMART 26again6 550 577 IPR006564 GO:0008270
Vivi1397g00002 753 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 611 IPR031052 GO:0006355
Vivi1397g00002 753 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1397g00002 753 ProSiteProfiles Zinc finger SWIM-type profile. 539 575 IPR007527 GO:0008270
Vivi1397g00002 753 Pfam SWIM zinc finger 552 572 IPR007527 GO:0008270
Vivi1397g00002 753 Pfam FAR1 DNA-binding domain 48 132 IPR004330 -
Vivi1397g00002 753 MobiDBLite consensus disorder prediction 631 661 - -
Vivi1397g00002 753 Pfam MULE transposase domain 254 348 IPR018289 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1397g00002 MULE 5.6e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1397g00002 - - vvo:131641577 1538.09