Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi137g00013 ATGGCAAAAGAAGATAAAGGATATGCCGTTGGAATAGACCTTGGAACTACGTACTCTTGTGTTGGTGTGTGGCAAGAACAACATGGTAGAGTTGAGATTATTCACAATGATCATGGCAACAAAATTACTCCTTCTTTTGTTGCTTTTACTCATGATCATCAAAGATTGATTGGTAATGCTGCTAAAAATCAAGCTGCCATAAATCCTGAAAACACTGTCTTTGATGCTAAGAGGCTAATTGGTAGAAAGTTTAGTGATTCTATAGTCCAGAAAGATATAATGTTGTGGCCATTCAAGGTCATTGCGGGTGTGAATGATAAATCAATGATTTCCCTCAAGTATAAAGGGCAAGATAAGAGCTTCTGTGCAGAGGAAATCTCTTCTATGGTACTTACAAAAATGCGGGAGATTGCAGAGGCATATTTGGAATCACCACGAAAAGCCACTATTAATGCCGGTGTCATTGCTGGTCTTAATGTTTTGAAGATAATCAATGAACCAACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAATTAACTGCGTGGGAGAACGGAATATTTTTGTGTTTGACCTTGGTGGTGGGACTTTTGATGTGTCTATTCTTACTATCAAGGATAAGGTCTTTAAAGTTAAGGCTACTGCAGGAAACACTCACCTTGGGGGAGAGGATTTTGATAGTAGAATGGTGAACTATTTTGTAGAGGAGATCAAGAGGAAGAAAAAGTTAGACATTATTGGGAATCCAAAAGCCTTGAGGAGGTTGAGAACTGCGTGTGAGAAGGCGAAACGAGCACTTTCTTATGCTAATATGACCAATGTTGAGGTGGATGCTTTATTTCAAGGTGTTGATTTTTCTTCATCTATCACGCGTGCGAAATTTGAAGAAATCAATATGGATCTTTTTGACGAATGTATGGAGATTGTCGAGAAGTGTCTTACCGATGCTAAGATGGACAAGAGTAACGTTGACGATGTTGTCCTTGTTGGTGGATCTTCTAGGATACCTAAAGTGCAGCAACTATTGCAGGACTTCTTCCATGGGAAGGAATTATGTAGGAGTATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGTAAAAGCATTAAGAATGGTCCAAACTTGGCTTACCACCTGCTCCTCGCGGCCATTCTTATGATTTTTTCTGCTATGGATAAATCCACTGGCAGTAAGAATGAGGTTACAATAACAAATGACAAAGGAAGGTTTGATATGCTTTACAGTATTTCACTTGGTTAA 1284 0.3972 MAKEDKGYAVGIDLGTTYSCVGVWQEQHGRVEIIHNDHGNKITPSFVAFTHDHQRLIGNAAKNQAAINPENTVFDAKRLIGRKFSDSIVQKDIMLWPFKVIAGVNDKSMISLKYKGQDKSFCAEEISSMVLTKMREIAEAYLESPRKATINAGVIAGLNVLKIINEPTAAAIAYGLDKRINCVGERNIFVFDLGGGTFDVSILTIKDKVFKVKATAGNTHLGGEDFDSRMVNYFVEEIKRKKKLDIIGNPKALRRLRTACEKAKRALSYANMTNVEVDALFQGVDFSSSITRAKFEEINMDLFDECMEIVEKCLTDAKMDKSNVDDVVLVGGSSRIPKVQQLLQDFFHGKELCRSINPDEAVAYGAAVQAALLSKSIKNGPNLAYHLLLAAILMIFSAMDKSTGSKNEVTITNDKGRFDMLYSISLG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi137g00013 427 FunFam Heat shock cognate 70 kDa protein 2 306 353 - -
Vivi137g00013 427 FunFam Heat shock 70 kDa 222 305 - -
Vivi137g00013 427 Gene3D - 74 129 - -
Vivi137g00013 427 PANTHER HEAT SHOCK PROTEIN 70KDA 9 384 IPR013126 GO:0005524|GO:0140662
Vivi137g00013 427 FunFam heat shock 70 kDa protein-like 74 129 - -
Vivi137g00013 427 Gene3D - 10 371 - -
Vivi137g00013 427 Gene3D Actin; Chain A, domain 4 222 305 - -
Vivi137g00013 427 Pfam Hsp70 protein 9 375 IPR013126 GO:0005524|GO:0140662
Vivi137g00013 427 SUPERFAMILY Actin-like ATPase domain 7 178 IPR043129 -
Vivi137g00013 427 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi137g00013 427 Gene3D - 179 353 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 356 376 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 133 153 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 61 69 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 196 206 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 324 340 - -
Vivi137g00013 427 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi137g00013 427 ProSitePatterns Heat shock hsp70 proteins family signature 3. 327 341 IPR018181 -
Vivi137g00013 427 SUPERFAMILY Actin-like ATPase domain 185 373 IPR043129 -
Vivi137g00013 427 ProSitePatterns Heat shock hsp70 proteins family signature 2. 190 203 IPR018181 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi137g00013 1 374 Calmodulin-binding Proteins AT5G02500 70.513 0.0 572