Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi137g00012 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCAGCGTACCGACGATCCGGCCGATCCGCCAGCTTCAATCAGCAGCGAGGGAACACCGGTGGTTCATACGTTAAGAGCGGTACCGGCGGGGCCGCGCCTTCAGTCTCCTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAACCCAGCCCCAGCAACGTCAGCTGTGCCTAATTATGCTTCTGCAGTCCGAGCAACACCGAATGGTTCCCATGTACACCAGCCGCAATTTCATGGAGGGTCTGATGCTTCAGTTACTAATGCAAGTGCCAAGCCATCCGAATCATCAGCTGTACAAAAGAGCACCGGAGTTGTTTCTAAAGCTCCTATTTCTCAACCTCCCTCCGTGAGTTCTGGTTCAGCAGCACCTACAACTCCTGCTAAGGTAGATGCATCCAAGGCTTTCCCTTTCCAATTTGGATCTCTTAGTCCCGGCGTTATGAATGTGATGGCAATTCCTGCTCGCACAAACTCGGCTCCTCCTAATTTTGATGAGCAGAAGCGTGATCAGGCTCGCCATGATTCTTTAAGGCCCGTGCCTTCTGTACCAACTCCTCCTGTTCCAAAGCAGCAGCCAGCAAAAAAGGATACAGGTGCCTTCGACCATAAGGCCGGGGAGACTCATACTGGTACAGTGGCAAAAAAGGATGCTCAAGTGTCACTTTTACCCCCAGCAAATCTAATGCAGAAGCCTTCTGTTATTCCTCTAGCTGGAGTTTCAATGCCAGGGCCATATCACCAGTCACAGGCACCTGTACACTTTGGTGCTGCTAATCCACAAATTCAGTCTCATGGTATGTCAACAGCACCTCTTCAGATGCCTTTACCAATGCCTTTTCCAATTGGAAGTGCTGCACAAGTGCAACAATCGATGTTTGTTCCAAGTCTTCAACCTCATCCTATTCATCCACAAGGAATCATGCATCAAGTCCAAAATATAGGTTACAGTCCTCAAATTGGTCATCAATTGCCCCATCATTTTGGCAACATGGGTATGGGCATCAACCCACAATATTCCCCACAGCAAGGAGGAAAAATTGCTATACCTCGGAAAACCACTCCTGTGAAAATAACTCACCCTGATACACACGAAGAGCTTAGACTTGATAAAAGGGCAGCTGGTGGTGGGTCATCAGGTGGTAGGTCTTATTCTGGCATGCTTTCTCAATCTCAATCTGTCCAGAGCCAGATAACAACCAATGCTCAGCCACCAAGAGTTTCTCGTGACGTGCCTAATGCAATCCCGTCAACTCTTTTAGGAGTATCTTCTGTATCTATAAAGCCAAGTGGTGGGTCTGGTATTGTAAACTCATCATTTGCCAATTCCAATATTTCCGGTGCTCAAAAGGGTGGATCTCCTAGTTCCTTAGTAACATCTAGTGATGTTTACTCTTTGGTGCCACCAAAAGGCCCTGAAATTTGTTCTGAAGTCTCTTCTCAACAATCTACTGCTGCATCTGCTTCTAGTGAGAAACTTACATTAACTTCCTTGTTGCCTTCTTCAACTACTATTAGTGAGCATTCTGTGTCAGCTGTATCCAATAATGAAGGCAGAAACCAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGACAATCAGAAGAAACTACAAATGAAAGGCCAATTGCAGAATCAGGTGGCTGTGCAATCTTCTGCTGTGGCTAATAAACCTCCCCTAGCTGGTGATGGTTGTATCTCTAATTGTGGAGTTTCTGAAATTTTAGGAACTAAAACACCCTATTCTGCAGCAACTGCCCACGAAGATCTTTTAGCAATAGCTTCTGGAACAAATTCAGCTACCAGGGAGAGCGTGTCTTCTTCTGTTGAAGAGAAGACCAATGGTTCTACACAGGTGTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCTGTGGATAGCTTGAACAATCATAAGAGTGATATGCTAGATGTATTATCCCGAGAGGGTAAACAGCTGAGGCAGAACAATTTAGCTGGTGATAAAACTGAAATTTCAACTGTGCCGATAAGTAAAAATGTTAGTGATAACGGGGCAGAACTTAGCCACCTCAAAAAAGGTGCTTCAGAGTTAGGGTCTGGGGTTGTAACTTCAAGGACTGGGCTGCAAGGACAGGATGGAATTGAATCTGCAAGTTCCAGCACAGATTGTGACAGGACGGCTGATAATTTAGGCATGTCTACTTCTGCATTGGATTCTAAAGATGCTTCTTTAAGCAGAATCGAAGGTGTAGTTAGTAATGAAACAACTTCTACAAATTCTGGCACATCAGATCATCAATCTTCTGGCCATCTTGAAACAAATTTAAAACATTGCAAGGATGGTTCAGAGGATTCTGGCACTGGCTCGGCCTCTCTTCCGGCAGCATCAGTTACTATGGACAAACCAATTTTAGAGCCAAGTAAGGTGAAAGGTACATCAAAGGGGAAAAAGAAACGAAAGGAAATTCTTCAAAAAGCAGATGCTTCTGGGTCAACAGCTGATCTTTATAATGCTTATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGCAAGTTCAGAGAGCACTGCAAATGTTTCTACTTCTGGAAATTCAAAGCAGCAGCCTATTGATGCTGCTCAGCCAGCTGTAGTTGCAAATAAACAATGTGAGCAGAGTAAGGCTGAGCCTGAGGACTGGGAGGATGCTGCAGACATGTCCGCACCAAAGCTAGGAGTATCAGCTAAAACTCAACAGGACAGCAATGGAAGTGCAGTTACTGACAAAAAGTACTCTCGAGATTTCCTTTTGAAATTTGCAGAGCAATGCTCTGATCTTCCTGAAGGGTTTGAAATCGCGGCAGACATAGCTGAAACTTTGATGGGTTCTAATATTGGTTCTCATGTTATTGAACGCGACTCACATCCTTCCACTGGCAGAAACACAGATAGGTCAGGTGGCATGTCTCGGATGGATCGTCGTGGAAGTGGCATTATTGAGGACGATAAATGGAGTAAGGCTTCTGGTGCTTTTCATTCTGATATGCGCCTGGATGGTATTGGAGGTAGTGCAGGATCCCGACGTGGCCAAGGAGGTAATTTTGGTGTTTTAAGGAATCCAAGTGTACAGACAGCTATGCAATATGGTGGAGGGATTCTCTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTTCTCAATCTCCTTTGGTGGCGATGCACAAAGCTGAGAAGAAGTATGAGGTTGGTAAAGTAACAGATGAGGAACAGGCGAAGCAGAGACAGTTGAAGGGAATATTGAACAAGTTAACTCCACAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCTACCTTTTGTGAAATGTATGCCGATTTCTGTTTTCATCTGGCAGCTGCATTGCCCGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATCAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCAGATTAATTGGAGAGCTATATAAAAAGAGAATGCTGACAGAGAGGATAATGCACGAGTGCATCAAAAAGTTACTGGGTCAGTGTCAGAATCCTGACGAAGAAGATATTGAAGCTTTATGCAAACTGATGAGTACTATTGGGGGGATGATTGATCACCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGATTAAATTATTATCAAACAACATGAGTTTATCTTCTAGGTTGAGGTTCATGTTGAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACCGAGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCCAGGCCGTGGTATGGGTATTAGTGCAGCAAGAAGGGTCCCTATGGATTTTGGTTCACGAGGTTCATCTATGTTATCCCCTCCTAATGTTCAGATGGGTGGATTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGTTCGTGGATATGAAAGGCAATCATCGTATGAGGCTAGGACACCGTCTATTCCATTGCCTCAAAGACCTTCAGGTGATGAGTCAATAACCCTGGGACCCCAAGGCGGTCTTGCTAGAGGAATGTCCATTAGAGGTTCTGCAGTTTCAAATTTTGCTGGCCTTAACAGTTATAGTAATTTACCGGAGCGCGCTTCTTACAGTCCTAGGGAGGACTTCACACCAAGATATATTCCAAATAGATCTGCTGGTCCAACTGCTTATGATCAATCAAGTGCTCAAGACCATAGTATGGATTACGGTAACAAGGATTTGAGAAATGCAGATAGATTTCTTGATAGATCCGGTGTGAATTCTCCTCCTGCCCAAGTACAAGAGACAGCAGTCTCCCAGAACACCTCTTCAGAAAAGGGTTTGTCAGATGAGAAACTACAGAACATGTCCATGGCAGCAATTAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTTTGTGCGTCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCGATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACACACAGAGATCTCTTAGCCAAATTGCTGATAGACCTTGTGAAATCTCACGGTGGTATCTTAAGTCAAACTCAACTCATCGAAGGGTTTGAATCTGTTCTAAGTACCTTGGAAGATGTGGTTACGGATGCCCCAAAAGCACCGGAGTATCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGCCCCTTTGAAAGAGATTGGGCGCTTGATACATGATGGCGGATACGAATCAGGGAGCCTCTTACAAATTGGACTTGCTGCTGATATTCTTGGAAGCACACTGGAAGTGATACAAACAGAGAAGGGTGATGCATTCTTGAATGAGATTCAGACAAAATCCAACTTGCAGTTGCAGACCTTCATGCCTCCAGGACCTATTAAATCCCGCAAGCTAGAGAAATTCATTTAG 5268 0.4423 MSFNQSKSDKSDAAYRRSGRSASFNQQRGNTGGSYVKSGTGGAAPSVSSSRSFNKKSNNHAQGGPSRVNPAPATSAVPNYASAVRATPNGSHVHQPQFHGGSDASVTNASAKPSESSAVQKSTGVVSKAPISQPPSVSSGSAAPTTPAKVDASKAFPFQFGSLSPGVMNVMAIPARTNSAPPNFDEQKRDQARHDSLRPVPSVPTPPVPKQQPAKKDTGAFDHKAGETHTGTVAKKDAQVSLLPPANLMQKPSVIPLAGVSMPGPYHQSQAPVHFGAANPQIQSHGMSTAPLQMPLPMPFPIGSAAQVQQSMFVPSLQPHPIHPQGIMHQVQNIGYSPQIGHQLPHHFGNMGMGINPQYSPQQGGKIAIPRKTTPVKITHPDTHEELRLDKRAAGGGSSGGRSYSGMLSQSQSVQSQITTNAQPPRVSRDVPNAIPSTLLGVSSVSIKPSGGSGIVNSSFANSNISGAQKGGSPSSLVTSSDVYSLVPPKGPEICSEVSSQQSTAASASSEKLTLTSLLPSSTTISEHSVSAVSNNEGRNQESLSRSNSLKDNQKKLQMKGQLQNQVAVQSSAVANKPPLAGDGCISNCGVSEILGTKTPYSAATAHEDLLAIASGTNSATRESVSSSVEEKTNGSTQVSACASAEGPVTQAVDSLNNHKSDMLDVLSREGKQLRQNNLAGDKTEISTVPISKNVSDNGAELSHLKKGASELGSGVVTSRTGLQGQDGIESASSSTDCDRTADNLGMSTSALDSKDASLSRIEGVVSNETTSTNSGTSDHQSSGHLETNLKHCKDGSEDSGTGSASLPAASVTMDKPILEPSKVKGTSKGKKKRKEILQKADASGSTADLYNAYKGPEEKKEAVASSESTANVSTSGNSKQQPIDAAQPAVVANKQCEQSKAEPEDWEDAADMSAPKLGVSAKTQQDSNGSAVTDKKYSRDFLLKFAEQCSDLPEGFEIAADIAETLMGSNIGSHVIERDSHPSTGRNTDRSGGMSRMDRRGSGIIEDDKWSKASGAFHSDMRLDGIGGSAGSRRGQGGNFGVLRNPSVQTAMQYGGGILSGPMQSMVNQGGMQRNSPDGERWQRAASFQQRGLIPSPSSQSPLVAMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYADFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANQADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGGMIDHPKAKEHMDVYFERIKLLSNNMSLSSRLRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRPGRGMGISAARRVPMDFGSRGSSMLSPPNVQMGGLPTQVRGYGSQDVRGYERQSSYEARTPSIPLPQRPSGDESITLGPQGGLARGMSIRGSAVSNFAGLNSYSNLPERASYSPREDFTPRYIPNRSAGPTAYDQSSAQDHSMDYGNKDLRNADRFLDRSGVNSPPAQVQETAVSQNTSSEKGLSDEKLQNMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTHRDLLAKLLIDLVKSHGGILSQTQLIEGFESVLSTLEDVVTDAPKAPEYLGRIFAKAITEHVAPLKEIGRLIHDGGYESGSLLQIGLAADILGSTLEVIQTEKGDAFLNEIQTKSNLQLQTFMPPGPIKSRKLEKFI 1755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi137g00012 1755 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 352 1755 IPR045208 GO:0003743
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1352 1373 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 216 231 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 866 885 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1542 1566 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1 148 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 618 638 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1352 1462 - -
Vivi137g00012 1755 Gene3D - 1127 1362 - -
Vivi137g00012 1755 ProSiteProfiles MI domain profile. 1567 1691 IPR003891 -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 402 427 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 976 1002 - -
Vivi137g00012 1755 Coils Coil 1209 1229 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 857 911 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1477 1566 - -
Vivi137g00012 1755 SMART ma3_7 1568 1682 IPR003891 -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 716 784 - -
Vivi137g00012 1755 Pfam MIF4G domain 1127 1348 IPR003890 GO:0003723|GO:0005515
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 527 564 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 18 146 - -
Vivi137g00012 1755 SUPERFAMILY ARM repeat 1561 1750 IPR016024 -
Vivi137g00012 1755 Pfam MA3 domain 1574 1679 IPR003891 -
Vivi137g00012 1755 SMART if4_15 1127 1349 IPR003890 GO:0003723|GO:0005515
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 178 236 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 716 842 - -
Vivi137g00012 1755 SUPERFAMILY ARM repeat 1121 1351 IPR016024 -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 379 434 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1219 1248 - -
Vivi137g00012 1755 FunFam Eukaryotic translation initiation factor 4G 1127 1362 - -
Vivi137g00012 1755 Gene3D - 1559 1755 - -
Vivi137g00012 1755 FunFam Eukaryotic translation initiation factor 4G 1561 1754 - -
Vivi137g00012 1755 MobiDBLite consensus disorder prediction 1508 1522 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi137g00012 738 1754 Eukaryotic Initiation Factors Gene Family AT3G60240 54.572 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi137g00012 K03260 - gmx:100790680 2207.18