Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi137g00011 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCAGCGTACCGACGATCCGGCCGATCCGCCAGCTTCAATCAGCAGCGAGGGAACACCGGTGGTTCATACGTTAAGAGCGGTACCGGCGGGGCCGCGCCTTCAGTCTCCTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAACCCAGCCCCAGCAACGTCAGCTGTGCCTAATTATGCTTCTGCAGTCCGAGCAACACCGAATGGTTCCCATGTACACCAGCCGCAATTTCATGGAGGGTCTGATGCTTCAGTTACTAATGCAAGTGCCAAGCCATCCGAATCATCAGCTGTACAAAAGAGCACCGGAGTTGTTTCTAAAGCTCCTATTTCTCAACCTCCCTCCGTGAGTTCTGGTTCAGCAGCACCTACAACTCCTGCTAAGGATGCATCCAAGGCTTTCCCTTTCCAATTTGGATCTCTTAGTCCCGGCGTTATGAATGTGATGGCAATTCCTGCTCGCACAAACTCGGCTCCTCCTAATTTTGATGAGCAGAAGCGTGATCAGGCTCGCCATGATTCTTTAAGGCCCGTGCCTTCTGTACCAACTCCTCCTGTTCCAAAGCAGCAGCCAGCAAAAAAGGATACAGGTGCCTTCGACCATAAGGCCGGGGAGACTCATACTGGTACAGTGGCAAAAAAGGATGCTCAAGTGTCACTTTTACCCCCAGCAAATCTAATGCAGAAGCCTTCTGTTATTCCTCTAGCTGGAGTTTCAATGCCAGGGCCATATCACCAGTCACAGGCACCTGTACACTTTGGTGCTGCTAATCCACAAATTCAGTCTCATGGTATGTCAACAGCACCTCTTCAGATGCCTTTACCAATGCCTTTTCCAATTGGAAGTGCTGCACAAGTGCAACAATCGATGTTTGTTCCAAGTCTTCAACCTCATCCTATTCATCCACAAGGAATCATGCATCAAGTCCAAAATATAGGTTACAGTCCTCAAATTGGTCATCAATTGCCCCATCATTTTGGCAACATGGGTATGGGCATCAACCCACAATATTCCCCACAGCAAGGAGGAAAAATTGCTATACCTCGGAAAACCACTCCTGTGAAAATAACTCACCCTGATACACACGAAGAGCTTAGACTTGATAAAAGGGCAGCTGGTGGTGGGTCATCAGGTGGTAGGTCTTATTCTGGCATGCTTTCTCAATCTCAATCTGTCCAGAGCCAGATAACAACCAATGCTCAGCCACCAAGAGTTTCTCGTGACGTGCCTAATGCAATCCCGTCAACTCTTTTAGGAGTATCTTCTGTATCTATAAAGCCAAGTGGTGGGTCTGGTATTGTAAACTCATCATTTGCCAATTCCAATATTTCCGGTGCTCAAAAGGGTGGATCTCCTAGTTCCTTAGTAACATCTAGTGATGTTTACTCTTTGGTGCCACCAAAAGGCCCTGAAATTTGTTCTGAAGTCTCTTCTCAACAATCTACTGCTGCATCTGCTTCTAGTGAGAAACTTACATTAACTTCCTTGTTGCCTTCTTCAACTACTATTAGTGAGCATTCTGTGTCAGCTGTATCCAATAATGAAGGCAGAAACCAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGACAATCAGAAGAAACTACAAATGAAAGGCCAATTGCAGAATCAGGTGGCTGTGCAATCTTCTGCTGTGGCTAATAAACCTCCCCTAGCTGGTGATGGTTGTATCTCTAATTGTGGAGTTTCTGAAATTTTAGGAACTAAAACACCCTATTCTGCAGCAACTGCCCACGAAGATCTTTTAGCAATAGCTTCTGGAACAAATTCAGCTACCAGGGAGAGCGTGTCTTCTTCTGTTGAAGAGAAGACCAATGGTTCTACACAGGTGTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCTGTGGATAGCTTGAACAATCATAAGAGTGATATGCTAGATGTATTATCCCGAGAGGGTAAACAGCTGAGGCAGAACAATTTAGCTGGTGATAAAACTGAAATTTCAACTGTGCCGATAAGTAAAAATGTTAGTGATAACGGGGCAGAACTTAGCCACCTCAAAAAAGGTGCTTCAGAGTTAGGGTCTGGGGTTGTAACTTCAAGGACTGGGCTGCAAGGACAGGATGGAATTGAATCTGCAAGTTCCAGCACAGATTGTGACAGGACGGCTGATAATTTAGGCATGTCTACTTCTGCATTGGATTCTAAAGATGCTTCTTTAAGCAGAATCGAAGGTGTAGTTAGTAATGAAACAACTTCTACAAATTCTGGCACATCAGATCATCAATCTTCTGGCCATCTTGAAACAAATTTAAAACATTGCAAGGATGGTTCAGAGGATTCTGGCACTGGCTCGGCCTCTCTTCCGGCAGCATCAGTTACTATGGACAAACCAATTTTAGAGCCAAGTAAGGTGAAAGGTACATCAAAGGGGAAAAAGAAACGAAAGGAAATTCTTCAAAAAGCAGATGCTTCTGGGTCAACAGCTGATCTTTATAATGCTTATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGCAAGTTCAGAGAGCACTGCAAATGTTTCTACTTCTGGAAATTCAAAGCAGCAGCCTATTGATGCTGCTCAGCCAGCTGTAGTTGCAAATAAACAATGTGAGCAGAGTAAGGCTGAGCCTGAGGACTGGGAGGATGCTGCAGACATGTCCGCACCAAAGCTAGGAGTATCAGCTAAAACTCAACAGGACAGCAATGGAAGTGCAGTTACTGACAAAAAGTACTCTCGAGATTTCCTTTTGAAATTTGCAGAGCAATGCTCTGATCTTCCTGAAGGGTTTGAAATCGCGGCAGACATAGCTGAAACTTTGATGGGTTCTAATATTGGTTCTCATGTTATTGAACGCGACTCACATCCTTCCACTGGCAGAAACACAGATAGGTCAGGTGGCATGTCTCGGATGGATCGTCGTGGAAGTGGCATTATTGAGGACGATAAATGGAGTAAGGCTTCTGGTGCTTTTCATTCTGATATGCGCCTGGATGGTATTGGAGGTAGTGCAGGATCCCGACGTGGCCAAGGAGGTAATTTTGGTGTTTTAAGGAATCCAAGTGTACAGACAGCTATGCAATATGGTGGAGGGATTCTCTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTTCTCAATCTCCTTTGGTGGCGATGCACAAAGCTGAGAAGAAGTATGAGGTTGGTAAAGTAACAGATGAGGAACAGGCGAAGCAGAGACAGTTGAAGGGAATATTGAACAAGTTAACTCCACAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCTACCTTTTGTGAAATGTATGCCGATTTCTGTTTTCATCTGGCAGCTGCATTGCCCGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATCAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCAGATTAATTGGAGAGCTATATAAAAAGAGAATGCTGACAGAGAGGATAATGCACGAGTGCATCAAAAAGTTACTGGGTCAGTGTCAGAATCCTGACGAAGAAGATATTGAAGCTTTATGCAAACTGATGAGTACTATTGGGGGGATGATTGATCACCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGATTAAATTATTATCAAACAACATGAGTTTATCTTCTAGGTTGAGGTTCATGTTGAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACCGAGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCCAGGCCGTGGTATGGGTATTAGTGCAGCAAGAAGGGTCCCTATGGATTTTGGTTCACGAGGTTCATCTATGTTATCCCCTCCTAATGTTCAGATGGGTGGATTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGTTCGTGGATATGAAAGGCAATCATCGTATGAGGCTAGGACACCGTCTATTCCATTGCCTCAAAGACCTTCAGGTGATGAGTCAATAACCCTGGGACCCCAAGGCGGTCTTGCTAGAGGAATGTCCATTAGAGGTTCTGCAGTTTCAAATTTTGCTGGCCTTAACAGTTATAGTAATTTACCGGAGCGCGCTTCTTACAGTCCTAGGGAGGACTTCACACCAAGATATATTCCAAATAGATCTGCTGGTCCAACTGCTTATGATCAATCAAGTGCTCAAGACCATAGTATGGATTACGGTAACAAGGATTTGAGAAATGCAGATAGATTTCTTGATAGATCCGGTGTGAATTCTCCTCCTGCCCAAGTACAAGAGACAGCAGTCTCCCAGAACACCTCTTCAGAAAAGGGTTTGTCAGATGAGAAACTACAGAACATGTCCATGGCAGCAATTAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTTTGTGCGTCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCGATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACACACAGAGATCTCTTAGCCAAATTGCTGATAGACCTTGTGAAATCTCACGGTGGTATCTTAAGTCAAACTCAACTCATCGAAGGGTTTGAATCTGTTCTAAGTACCTTGGAAGATGTGGTTACGGATGCCCCAAAAGCACCGGAGTATCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGCCCCTTTGAAAGAGATTGGGCGCTTGATACATGATGGCGGATACGAATCAGGGAGCCTCTTACAAATTGGACTTGCTGCTGATATTCTTGGAAGCACACTGGAAGTGATACAAACAGAGAAGGGTGATGCATTCTTGAATGAGATTCAGACAAAATCCAACTTGCAGTTGCAGACCTTCATGCCTCCAGGACCTATTAAATCCCGCAAGCTAGAGAAATTCATTTAG 5265 0.4424 MSFNQSKSDKSDAAYRRSGRSASFNQQRGNTGGSYVKSGTGGAAPSVSSSRSFNKKSNNHAQGGPSRVNPAPATSAVPNYASAVRATPNGSHVHQPQFHGGSDASVTNASAKPSESSAVQKSTGVVSKAPISQPPSVSSGSAAPTTPAKDASKAFPFQFGSLSPGVMNVMAIPARTNSAPPNFDEQKRDQARHDSLRPVPSVPTPPVPKQQPAKKDTGAFDHKAGETHTGTVAKKDAQVSLLPPANLMQKPSVIPLAGVSMPGPYHQSQAPVHFGAANPQIQSHGMSTAPLQMPLPMPFPIGSAAQVQQSMFVPSLQPHPIHPQGIMHQVQNIGYSPQIGHQLPHHFGNMGMGINPQYSPQQGGKIAIPRKTTPVKITHPDTHEELRLDKRAAGGGSSGGRSYSGMLSQSQSVQSQITTNAQPPRVSRDVPNAIPSTLLGVSSVSIKPSGGSGIVNSSFANSNISGAQKGGSPSSLVTSSDVYSLVPPKGPEICSEVSSQQSTAASASSEKLTLTSLLPSSTTISEHSVSAVSNNEGRNQESLSRSNSLKDNQKKLQMKGQLQNQVAVQSSAVANKPPLAGDGCISNCGVSEILGTKTPYSAATAHEDLLAIASGTNSATRESVSSSVEEKTNGSTQVSACASAEGPVTQAVDSLNNHKSDMLDVLSREGKQLRQNNLAGDKTEISTVPISKNVSDNGAELSHLKKGASELGSGVVTSRTGLQGQDGIESASSSTDCDRTADNLGMSTSALDSKDASLSRIEGVVSNETTSTNSGTSDHQSSGHLETNLKHCKDGSEDSGTGSASLPAASVTMDKPILEPSKVKGTSKGKKKRKEILQKADASGSTADLYNAYKGPEEKKEAVASSESTANVSTSGNSKQQPIDAAQPAVVANKQCEQSKAEPEDWEDAADMSAPKLGVSAKTQQDSNGSAVTDKKYSRDFLLKFAEQCSDLPEGFEIAADIAETLMGSNIGSHVIERDSHPSTGRNTDRSGGMSRMDRRGSGIIEDDKWSKASGAFHSDMRLDGIGGSAGSRRGQGGNFGVLRNPSVQTAMQYGGGILSGPMQSMVNQGGMQRNSPDGERWQRAASFQQRGLIPSPSSQSPLVAMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYADFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANQADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGGMIDHPKAKEHMDVYFERIKLLSNNMSLSSRLRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRPGRGMGISAARRVPMDFGSRGSSMLSPPNVQMGGLPTQVRGYGSQDVRGYERQSSYEARTPSIPLPQRPSGDESITLGPQGGLARGMSIRGSAVSNFAGLNSYSNLPERASYSPREDFTPRYIPNRSAGPTAYDQSSAQDHSMDYGNKDLRNADRFLDRSGVNSPPAQVQETAVSQNTSSEKGLSDEKLQNMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTHRDLLAKLLIDLVKSHGGILSQTQLIEGFESVLSTLEDVVTDAPKAPEYLGRIFAKAITEHVAPLKEIGRLIHDGGYESGSLLQIGLAADILGSTLEVIQTEKGDAFLNEIQTKSNLQLQTFMPPGPIKSRKLEKFI 1754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi137g00011 1754 ProSiteProfiles MI domain profile. 1566 1690 IPR003891 -
Vivi137g00011 1754 SMART if4_15 1126 1348 IPR003890 GO:0003723|GO:0005515
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 715 841 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 526 559 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 177 235 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1 152 - -
Vivi137g00011 1754 FunFam Eukaryotic translation initiation factor 4G 1560 1753 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1507 1521 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1541 1565 - -
Vivi137g00011 1754 FunFam Eukaryotic translation initiation factor 4G 1126 1361 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 379 433 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 18 146 - -
Vivi137g00011 1754 SUPERFAMILY ARM repeat 1560 1749 IPR016024 -
Vivi137g00011 1754 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 351 1754 IPR045208 GO:0003743
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1218 1247 - -
Vivi137g00011 1754 Pfam MIF4G domain 1126 1347 IPR003890 GO:0003723|GO:0005515
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 401 426 - -
Vivi137g00011 1754 Gene3D - 1126 1361 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 865 884 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 215 230 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1476 1565 - -
Vivi137g00011 1754 SUPERFAMILY ARM repeat 1120 1350 IPR016024 -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1351 1372 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 1351 1461 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 715 783 - -
Vivi137g00011 1754 Gene3D - 1558 1754 - -
Vivi137g00011 1754 SMART ma3_7 1567 1681 IPR003891 -
Vivi137g00011 1754 Pfam MA3 domain 1573 1678 IPR003891 -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 975 1001 - -
Vivi137g00011 1754 Coils Coil 1208 1228 - -
Vivi137g00011 1754 MobiDBLite consensus disorder prediction 856 910 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi137g00011 737 1753 Eukaryotic Initiation Factors Gene Family AT3G60240 54.572 0.0 984