Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi137g00006 ATGGCAAAAAAAGATGAAGGATATGCCATTGGAATAGACCTTGGAACTACGTACTCTTGTGTTGGTGTGTGGCAAGAACAACATGGTAGAGTTGAGATTATTCACAATGATCAAGGCAACAAAACTACTCCTTCTTTTGTTGCTTTTACTCAAGATCATCAAAGATTGATTGGTGATGCTGCTAAGAATCAAGCTGCCACTAATCCACAAAACACTGTCTTTGATGCTAAGAGGCTCATTGGTAGGAAGTTTAGCGATTCTATAATACAAAAAGATATGATGTTGTGGCCATTCAAGGTCATTGCGGGTGTGGATGACAAACCAATGATTTCCCTCGATTACAAGGGACATGAGAAGCACTTTAGTGCGGAGGAAATCTCGTCTATGGTACTTACAAAGATGCGGGAGATTGCAGAGGCATTTTTGGTATCTCCGGTTAAGAATGCTGTCATTACTGTCCCGGCTTATTTTAATGATTCGCAGCGAAAAGCCACTATAGATGCAGGTGCCATTGCTGGTCTTAATGTTTTGAAGATAATCAATGAACCAACCGCTGCAGCGATTGCATATGGCCTTGAAAAGAGAAGTAAATATGTTGGAGAGCGGAATATTTTTGTCTTTGACCTCGGTGGTGGGACTTTTGACGTGTCTCTTCTTACCATTAAGGATGATGTCTTCCAAGTGAAGGCCACGGCTGGAAACACTCACCTCGGGGGAGAAGACTTTGATAATAGAATGGTGAGTTACTTTGTAGAGGAGATCAAAAGGAAGAAAAAGTTGGACATTATTGGGAATCCAAAAGCCTTGCGGAGGTTGAGAACTGCGTGTGAGAAGGCCAAACGAACACTTTCTTTTGCTAACGTGACCAATGTTGAGGTAGATGCTTTATTTCAGGGTGTTGATTTTTCTTCGTCAATCACTCGTGCCAAGTTTGATGAAATCAATATGGATCTTTTTGAGGAGTGTATGGAGACTGTTGAGAAGTGTCTTACTGATGCTAAGATGGACAAGAGTAACGTTGACGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCTAAAGTGCAGCAACTATTGCAAGACTTCTTCCATGGGAAGGAAGTATGCAAGGGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCAGCGGTTCAGGCCGCTTTGTTGACTGGAAGCTTTAACAAAAGTTTTCACTTCATCGTTTTCATAATGGCAAAAAAAGACGAAGGATGTGCCGTTGGGATAGACCTTGGAACTACGTACTCATGTGTTGCTGTGTGGCAAGAACAGCATGGTAGAGTTGAGATTATTCACAATGATCATGGCAACAAAATTACTCCTTCTTTTGTTGCTTTTACTCATGATCATCAAAGATTGATTGGTAATGCTGCTAAAAATCAAGCTGCCATAAATCCTGAAAACACTGTCTTTGATGCTAAGAGACTGATTGGCAGGAAGTTTAGTGATCCTATTGTTCAAAAAGATATAATGTTGTGGCCATTCAAGGTCATTGCAGGTGTGAATGACAAACCAATGATTTCCCTCAACTATAAAGGGCAAGATAAGAGCTTCTGTGCCGAGGAAATCTCGTCTATGGTACTCACAAAGATGAGGGAGATTGCAGAGGCGTATTTGGAATCACCTGTTAAGAATGCTGTCATTACTGTCCCGGCTTATTTTAATGATTCGCAGCGAAAAGCCACTATTGATGCTGGTATCATTGTTGGTCTTAATGTTTTGAAGGTAATTAATGAACCAACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAATTAACTGCGTTGGAGAACGGAATATTTTTGTGTTTGACCTTGGTGGTGGGACTTTTGATGTGTCTCTTCTTACTATTAAGGATAAGGTCTTCCAAGTTAAGGCTACTGCAGGAAACACTCACCTTGGAGGAGAGGACATTGATAATAGAATGGTGAACTATTTTGTAGAGGAGATCAAAAGGAAGAAAAAGTTAGACATTATTGGGAATCCAAAAGCCTTGAGGAGGTTGAGAACTGCGTGTGAGAAGGCAAAACGAACACTTTCTTTTGCTAATGTGACCAATGTTGAGGTGGATGCTTTATTTCAGGGTGTTGATTTTTCTTCGTCAATCACTCGTGCCAAGTTTGATGAAATTAATATGGACCTTTTTGATGGGTGCATGGAGATTGTCGAGAAGTGTCTTACTGATGCTCAAATGGACAAGAGTAACGTTGACGATATTGTCCTTGTTGGTGGATCGTCTAGGATTCCTAAAGTGCAGCAACTATTGCAAGACTTCTTCCATGGGAAGGAAGTATGCAAGGGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCAGCGGTTCAGGCCGCTTTGTTGACTGGAAGCTTTAGCAGTGTTCCAAAATTGGTTCTGATGGATGTTGCACCACTGTCTCTTGGTTGGAAGTTAATAAATGATGTCATGGCTTTTGTAATTCCTAGGAACACTTCTATTCCTGTCAAGAAGACAAAACAATATGTTACGATTAAAGATGATCAGTTGAAAGTTTTGATTGAGGTCTACGAGGGTGAGAGACCAAAAGCAACTGATAATCATCTTCTTGGTTCCTTCATTCTTTCTGGTTTAACCCCTGCTCCTCGTGGCCATCCTTTCGATGTGTGCTTTAATGTTGATCAAAACGGTATTTTAACCGTTTCTGCCATCGATAACTCAACTGGTAGCATGAATGAAATTACAATAACCAATAACAAGGGAAGGTTGTCAACTGAAGAAATTAAAAGATTGATTCAAGAAGCTCAAGATTTCCGTATTGAAGATAAGAAATTCTTAAGAAAGGCGGAAGTAATGAATGCACTGGACCTCTGTATTTACAAAGTGAGAAATGAGTTGAAGAAGAAGGATATTAATCTAAAGCTCTCTTCAGAAGAAAACAAGAAGGTCAAGGATGCAATTACAATGGCTACAGATTTGCTTGATGAGAATGAGCAACAGAATGGAATTGATGTTCTCGAGGATCACCTGAATAAGCTTGAGAGTATGTATCAGCGCATTATAGCCAAATCCTGA 3066 0.4067 MAKKDEGYAIGIDLGTTYSCVGVWQEQHGRVEIIHNDQGNKTTPSFVAFTQDHQRLIGDAAKNQAATNPQNTVFDAKRLIGRKFSDSIIQKDMMLWPFKVIAGVDDKPMISLDYKGHEKHFSAEEISSMVLTKMREIAEAFLVSPVKNAVITVPAYFNDSQRKATIDAGAIAGLNVLKIINEPTAAAIAYGLEKRSKYVGERNIFVFDLGGGTFDVSLLTIKDDVFQVKATAGNTHLGGEDFDNRMVSYFVEEIKRKKKLDIIGNPKALRRLRTACEKAKRTLSFANVTNVEVDALFQGVDFSSSITRAKFDEINMDLFEECMETVEKCLTDAKMDKSNVDDVVLVGGSSRIPKVQQLLQDFFHGKEVCKGINPDEAVAYGAAVQAALLTGSFNKSFHFIVFIMAKKDEGCAVGIDLGTTYSCVAVWQEQHGRVEIIHNDHGNKITPSFVAFTHDHQRLIGNAAKNQAAINPENTVFDAKRLIGRKFSDPIVQKDIMLWPFKVIAGVNDKPMISLNYKGQDKSFCAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGIIVGLNVLKVINEPTAAAIAYGLDKRINCVGERNIFVFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDIDNRMVNYFVEEIKRKKKLDIIGNPKALRRLRTACEKAKRTLSFANVTNVEVDALFQGVDFSSSITRAKFDEINMDLFDGCMEIVEKCLTDAQMDKSNVDDIVLVGGSSRIPKVQQLLQDFFHGKEVCKGINPDEAVAYGAAVQAALLTGSFSSVPKLVLMDVAPLSLGWKLINDVMAFVIPRNTSIPVKKTKQYVTIKDDQLKVLIEVYEGERPKATDNHLLGSFILSGLTPAPRGHPFDVCFNVDQNGILTVSAIDNSTGSMNEITITNNKGRLSTEEIKRLIQEAQDFRIEDKKFLRKAEVMNALDLCIYKVRNELKKKDINLKLSSEENKKVKDAITMATDLLDENEQQNGIDVLEDHLNKLESMYQRIIAKS 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi137g00006 1021 PANTHER HEAT SHOCK PROTEIN 70KDA 412 984 IPR013126 GO:0005524|GO:0140662
Vivi137g00006 1021 SUPERFAMILY Actin-like ATPase domain 604 794 IPR043129 -
Vivi137g00006 1021 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vivi137g00006 1021 Gene3D - 950 1021 IPR029048 -
Vivi137g00006 1021 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 799 953 IPR029047 -
Vivi137g00006 1021 FunFam Heat shock 70 kDa protein 74 129 - -
Vivi137g00006 1021 ProSitePatterns Heat shock hsp70 proteins family signature 3. 746 760 IPR018181 -
Vivi137g00006 1021 FunFam Heat shock protein 70 413 604 - -
Vivi137g00006 1021 Gene3D - 598 772 - -
Vivi137g00006 1021 FunFam Heat shock 70 kDa protein 477 532 - -
Vivi137g00006 1021 FunFam Heat shock 70 kDa 641 724 - -
Vivi137g00006 1021 FunFam Heat shock protein 70 10 202 - -
Vivi137g00006 1021 FunFam Heat shock 70 kDa 238 321 - -
Vivi137g00006 1021 Gene3D - 477 532 - -
Vivi137g00006 1021 Gene3D - 74 129 - -
Vivi137g00006 1021 SUPERFAMILY Actin-like ATPase domain 411 597 IPR043129 -
Vivi137g00006 1021 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 797 949 IPR029047 -
Vivi137g00006 1021 ProSitePatterns Heat shock hsp70 proteins family signature 1. 415 422 IPR018181 -
Vivi137g00006 1021 SUPERFAMILY Actin-like ATPase domain 7 194 IPR043129 -
Vivi137g00006 1021 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Vivi137g00006 1021 SUPERFAMILY Actin-like ATPase domain 200 391 IPR043129 -
Vivi137g00006 1021 Gene3D Actin; Chain A, domain 4 641 724 - -
Vivi137g00006 1021 Gene3D Actin; Chain A, domain 4 238 321 - -
Vivi137g00006 1021 FunFam Heat shock cognate 70 kDa protein 2 322 369 - -
Vivi137g00006 1021 Coils Coil 1000 1020 - -
Vivi137g00006 1021 Gene3D - 413 790 - -
Vivi137g00006 1021 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi137g00006 1021 Pfam Hsp70 protein 9 394 IPR013126 GO:0005524|GO:0140662
Vivi137g00006 1021 Pfam Hsp70 protein 412 1019 IPR013126 GO:0005524|GO:0140662
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 881 897 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 552 572 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 801 820 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 441 453 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 615 625 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 775 795 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 411 424 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 464 472 - -
Vivi137g00006 1021 PRINTS 70kDa heat shock protein signature 743 759 - -
Vivi137g00006 1021 FunFam Heat shock 70 kDa protein 795 949 - -
Vivi137g00006 1021 ProSitePatterns Heat shock hsp70 proteins family signature 2. 609 622 IPR018181 -
Vivi137g00006 1021 Gene3D - 10 387 - -
Vivi137g00006 1021 Gene3D - 195 369 - -
Vivi137g00006 1021 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 947 1020 IPR029048 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi137g00006 1 403 Calmodulin-binding Proteins AT3G12580 73.449 0.0 626