Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi137g00004 ATGCAACTTCATAACCTTTGCATTGTTCTACCACAAAATTCAGGTGAAATCATGAAACAACAACATGAAAATGGTTTCCAACCGCAACAACAACAACCTAAGTCTAGAAACCCTTCAAGTGCTTGTGGTGGTGGAGGACAACAAGTTCTTGATTTGCTTCATGATTCATTGAGCAAGCTATGTAGTGGAAGATGGCTGGGAGGTGCAAAAAGAATTTGCAGACATAGGAGGGTGCAAAAAGCAAAAAAGAAAAACTCTTCAAGAGGTTCTGGTGCTACCATGTTTCATGACATGGATGGTGTTCAATTTGCTGTGAAGATTGGAAGAGACAATCCAAGGATTTTCAGCTATGCAGAACTTTTCATAGGCTCCAATGGTTTCAATGAAGAACAGGTTCTAGGAAGTGGAGGCTTTGGAAAAGTGTACAAAGCACTTTTGCCAAGTGATGGCACTTTGGTTGCTGTGAAATGTTGTTTATCAGAGAAGGGTAAGCAGTTTGACAAGAGTTTCTTAGCCGAGTTATCGGCCGTAGCCGATCTTCGTCACAAGAATCTCGTCCGGTTGAGAGGCTGGTGTGTACATGAAGATCGGCTTCATCTTGTTTATGACTACATGCCTAATCGAAGCCTTGATCGCGTGCTCTTTCGACGGAAGGAGAATACGAAAGGCGAGATTCTTGGTTGGGGACAAAGGTGTAGAATTGTGAAAGGCTTGGCTGCTGCATTGTACTATCTGCATGAACAGTTAGAGACTCAAATCATTCATAGAGATGTTAAGACTAGTAATGTTATGCTTGATTCGTATTACAATGCGAAGTTAGGCGATTTCGGTATGGCGAGGTGGTTAGAACATGAACTTGAGTATGAGTTTAAGTACAATTACAACAGCAGCAGCAACAGCAGTAATAAGAAAACTTCGAGTAGAATCGATCATTTCAGATTGGGGGAAACATCGAAAATCGGTGGAACAATTGGTTATCTTCCACCAGAAAGCTTGCAGAAACCGAGCAACGGCACGTCGAAATGTGATGTTTTTAGCTTTGGGATTGTTGTTCTTGAAATTGTGTCTGGTAGAAGAGCAATAGATCTTGCATACTCCGATGAGAAAATCATTCTGCTTGATTGGATTCGAAGGCTTTGCGACGAAGGGAAGCTTGTAGAAGCAGCTGATACAAGGCTACAAAAAGATGGATCATCATTCAATTTTTCTGAGATGAAGCATTTCATTCATATAGGTCTACTTTGCACACTTCATGATCCGAATTTGAGGCCTAATATGAAATGGGTTGTGGAAGCACTTTCTGATTTAAGTTTCAAACTTCCTTCACTTCCTTCTTTTCTATCACACCCTCTTTACATCTCTTTGTCTTCACCTTCTGAGACTACTAGTCCTAGTAGCACGAGCGGCACGATCTCGGCCTCAGCCGCGGATAACGTTAGCTTAATCACAAACTATAATAGTTCAACAAACTATTTCACAGCTGCAGGTGAAACAGTTTATGTGACAGCAGAAAATAAAAACAGCGGAATCATTTCTTCGAAGAGCGTGAATCGGAGTCATCACAGGCCGAACTTTCCGGTGGTTGAAACTCCGAGAGAAATTTCATACAAAGAGATTGTTTGTGCTACAAGTAACTTCTCAGAGTCAAGAAGAGTAGCTGAACTAGACTTTGGAACTGCTTATCATGGAATCCTCGACGACGATTGTCATGTTTTGGTGAAAAGGTTGGGAATGAAGACGTGTCCTGCGCTGCGCGTTCGGTTCTCGGACGAGCTCCGGAATCTAGGAAAGCTTAGGCATCGAAACTTGGTGCAGCTTCGCGGATGGTGCACCGAACAAGGGGAGATGCTCGTGGTTTATGATTACTCGGCTAGTAGAATTCTCAGTCAACAACTTCTCCAAATTCATAACAAAGGCGAGAACGGTTCGGTACTCGAATGGAATCATAGGTACAACATAGTTAAATCGCTTGCATCTGCTGTTCATTACCTACATGAAGAATGGGATGAGCAAGTGATTCACCGAAACATTACCTCTTCTGCTGTGATTCTCGAACAAGATATGAATCCAAGACTAAGCAGTTTCGCTCTAGCCGAATTCCTATCAAGGAACGAGCATGGAGACCATCATGTAGTCAGCGACAGTAGCAAATCCGTTAGAGGGATCTTCGGTTACATGTCGCCAGAATACATGGCATCGGGCGAAGCAACCACGGCTGCGGATGTTTATAGTTTCGGCGTGGTGGTACTCGAGGTCGTAAGTGGACAAATGGCAGTGGATTTTAGGTACAAAGATGTTCTTTTAGTGAAGAAAGTTCATGAGTTTGTGATGAAGAAAAGATCATTGAAGGAACTAGCTGATGTAAGACTCAATGGAGAGTATAATGAGAAAGAGTTGATGAGGTTGGTGAGATTAGGAATTGTGTGCACTAGTTGTGATGCTGAATTGAGACCAAACATGAGACAGATTGTGAGCATTCTTGATGGAAATGATAAATTGCTGAACATGGAAAAGAAGGAAAGTAGGGAAGATTGGAGAGAAAGAAATGGTAGTTCTTTGTCAATGGTTAGGAGGATTCAAGCTCTAGGTATACAGTAA 2598 0.4222 MQLHNLCIVLPQNSGEIMKQQHENGFQPQQQQPKSRNPSSACGGGGQQVLDLLHDSLSKLCSGRWLGGAKRICRHRRVQKAKKKNSSRGSGATMFHDMDGVQFAVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKALLPSDGTLVAVKCCLSEKGKQFDKSFLAELSAVADLRHKNLVRLRGWCVHEDRLHLVYDYMPNRSLDRVLFRRKENTKGEILGWGQRCRIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSYYNAKLGDFGMARWLEHELEYEFKYNYNSSSNSSNKKTSSRIDHFRLGETSKIGGTIGYLPPESLQKPSNGTSKCDVFSFGIVVLEIVSGRRAIDLAYSDEKIILLDWIRRLCDEGKLVEAADTRLQKDGSSFNFSEMKHFIHIGLLCTLHDPNLRPNMKWVVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTSPSSTSGTISASAADNVSLITNYNSSTNYFTAAGETVYVTAENKNSGIISSKSVNRSHHRPNFPVVETPREISYKEIVCATSNFSESRRVAELDFGTAYHGILDDDCHVLVKRLGMKTCPALRVRFSDELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLLQIHNKGENGSVLEWNHRYNIVKSLASAVHYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGDHHVVSDSSKSVRGIFGYMSPEYMASGEATTAADVYSFGVVVLEVVSGQMAVDFRYKDVLLVKKVHEFVMKKRSLKELADVRLNGEYNEKELMRLVRLGIVCTSCDAELRPNMRQIVSILDGNDKLLNMEKKESREDWRERNGSSLSMVRRIQALGIQ 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi137g00004 865 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Vivi137g00004 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Vivi137g00004 865 Gene3D Phosphorylase Kinase; domain 1 100 204 - -
Vivi137g00004 865 Pfam Protein tyrosine and serine/threonine kinase 551 827 IPR001245 GO:0004672|GO:0006468
Vivi137g00004 865 ProSiteProfiles Protein kinase domain profile. 546 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi137g00004 865 Gene3D Transferase(Phosphotransferase) domain 1 205 439 - -
Vivi137g00004 865 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
Vivi137g00004 865 FunFam Receptor like protein kinase S.2 505 622 - -
Vivi137g00004 865 PANTHER - 87 435 - -
Vivi137g00004 865 ProSiteProfiles Protein kinase domain profile. 127 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi137g00004 865 FunFam Receptor like protein kinase S.2 205 439 - -
Vivi137g00004 865 SUPERFAMILY Protein kinase-like (PK-like) 522 827 IPR011009 -
Vivi137g00004 865 FunFam Receptor like protein kinase S.2 624 850 - -
Vivi137g00004 865 Pfam Protein kinase domain 127 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi137g00004 865 MobiDBLite consensus disorder prediction 21 44 - -
Vivi137g00004 865 SUPERFAMILY Protein kinase-like (PK-like) 112 471 IPR011009 -
Vivi137g00004 865 SMART serkin_6 127 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi137g00004 865 Gene3D Transferase(Phosphotransferase) domain 1 629 853 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi137g00004 531 835 Receptor kinase-like Gene Family AT3G59740 33.442 1.51e-47 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi137g00004 PK_Tyr_Ser-Thr 3.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi137g00004 - - gmx:100796108 1229.16