Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1375g00009 ATGGCTTTAACTTTAACTTCAACTTCGACGCACCTTCGTTTTCAACCTTTACTCTCGCGCACCAACTACGTCTTCTTCTCCGACCTTACTGAATTCCGTTCTCTACAGAGTCATGATTCTCTCACTCTTCTTCGCCGGAGAAAGATCTCCGTTACGTCACCGTCGGCTCTGAAGCCGGTGAAATGCAGTAGATCCACGGAGGAGAAGCAGTGGAGCGAGGCGGAAACCGTTCCGTCTGATGCCGATGAAGCTGTGGATGAGTCAAATGGTCCGACTCCGATCCGAACTCCTTCTATTGAGCCTCAGAGGATTGCAGGCGATTCTCCTTCTCTCGGAATTCGAGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGACGGTGCAGTATCGACTCGAAAAATAAACAGGAGACAATTATTGAAGTCCAGTGGTCTTCGTCCCCGGGATGTCCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACCTGGGTTCGCTACGCGCAATAGCAATGCAAGATTGTGTGCTTATATTTGACTATAATCGTAAAGGTGGGCAAGCTTTTCTAGACACTTTGCTGCCTAGGTTGAACCCCAAGAATAACAATGGAGGGCCATCAATGCCATTTGAAATTGAGGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGCATTGCCAAATCGGATAACTGGGGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCGAAGGCAGGAGCTCTCCGACAGATGCTTCTTGACCTTCTGGAGGACCCAAATGAAATACGGCGGATGTGTATTATGGGAAGAAACTGTACACTTAATAAAGGAAACAATAATGTGGAATGCTCAGTGCCCTTAGAAAAGCAGGTTGCTGATGAGGAGGAGGAGGAAATTGAAATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGTCAATCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAGGATTCTATAGCTGTCAGTTTGAGCTCGCGAAGACTTGAAGTTAGTAGAGTGGAACTGCTTCTCCAGGTTGGAACATTTTGTGTAGCAGTTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTTGCATTCTGGCTAACTACATCTGGGATCATTATTGGTGGCATTATTGTTTTTTTCCTTATGTATAACTACCTCAGAGCAAGAAAAATATTTTGA 1344 0.4442 MALTLTSTSTHLRFQPLLSRTNYVFFSDLTEFRSLQSHDSLTLLRRRKISVTSPSALKPVKCSRSTEEKQWSEAETVPSDADEAVDESNGPTPIRTPSIEPQRIAGDSPSLGIREPVYEVVEVKSDGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLDTLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPNEIRRMCIMGRNCTLNKGNNNVECSVPLEKQVADEEEEEIEMLLENYLQRCESCHGQSERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTSGIIIGGIIVFFLMYNYLRARKIF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1375g00009 447 Gene3D Magnesium transport protein CorA, transmembrane region 195 378 - -
Vivi1375g00009 447 Gene3D - 113 194 - -
Vivi1375g00009 447 MobiDBLite consensus disorder prediction 55 106 - -
Vivi1375g00009 447 Coils Coil 236 256 - -
Vivi1375g00009 447 FunFam Magnesium transporter MRS2-11, chloroplastic 196 378 - -
Vivi1375g00009 447 CDD Mrs2_Mfm1p-like 120 446 IPR039204 -
Vivi1375g00009 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 84 446 IPR039204 -
Vivi1375g00009 447 Coils Coil 327 347 - -
Vivi1375g00009 447 MobiDBLite consensus disorder prediction 62 76 - -
Vivi1375g00009 447 FunFam Magnesium transporter MRS2-11, chloroplastic 113 194 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1375g00009 111 447 MRS2 Gene Family AT5G22830 82.196 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1375g00009 K16075 - gmx:100808371 672.544