Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1371g00002 ATGTCCCTCAAGCTTGTGTTGGTGCTGTATTTTCTGGTTACAGTGGTAGCAAGTAAAGATGTCAGTTTCATCTATAACAATGGATTCCAATCATCTCATTTGTATCTTGATGGTATTGCTGAGTTAACCTCCAATGGGTTACTCAGACTCACCAATGACACCAACCAAGAAAAGGCTCATGCTTTTTATCCAAATCCTATACTTTTCAAGAATACTTCCAATGGAAGTGTGTCTTCTTTCTCAACTACTTTTGTGTTTGCCATAAGACATGAAATTCCAGTTATTAGTGGTCATGGAATTGTTTTTGTTGTTTCTCCAACAAAAGGGTTACCAAATTCACTACCAAGTCAATACCTTGGTCTATTTAACAAATCCAACAATGGAAACAGTAGCAACCATGTTTTTGGGGTGGAACTTGATACTATTCAAAGCAGTGAGTTTAATGATATCAATGGCAACCATGTTGGTATTGATATCAATGATTTGAAATCAGCTACTTCAACTCCTGCAGGATATTATGACAATAATGGTCAGTTGAAGAATTTGACCCTTATCAGTGGCTATCCTATGCAGGTTTGGATTGAATATGATGGTGAAAAGAAGAAGATTGATGTTACTTTAGCTCCTATTAATGTTGTTAAACCAAAACAACCTTTGTTGTCAATTGTCAAAGATCTTTCTCCAATTCTTCACAATAGTATGTATGTTGGGTTTTCATCAGCTACTGGATCTGTTCATACTTCTCATTATATTCTTGGCTGGAGTTTTAGGCTTAATGGTCAAGCTCAAAACTTTGTAATTTCTGAACTTCCTAAGCTACCAAGACTTGGCAAGAAAAAAGAGTCCAAATTTTTAATTTTTGGGTTGCCTTTGATTTTGCTCAGTTTGGTTTTCATGTCAATATTAGGGGCTATTTATTTCATCAAAAGGAGGAAGAAATTTGCTGAGTTGCTTGAAGATTGGGAAGATGAATATGGCCCACATAGATTTAAGTTCAAAGATTTATACTTTGCCACAAAGGGTTTCAGGGAAAAGGAATTATTGGGAGTTGGTGGATTTGGAAGAGTCTACAAAGGTGTGATGCCAGGTTCCAAACTTGAGGTTGCTGTGAAGAGAGTTTCACATGAATCAAGACAAGGAATGAGGGAATTTGTATCGGAAATTGTTAGTATCGGTCGCCTTTGCCACCGGAATCTTGTTCCACTTCTCGGCTATTGCAGGCGAAAAGGCGAGTTGCTTCTGGTCTATGATTACATGCCTAATGGAAGTTTAGACAACTATCTATACAACCAACCAAAAATGAGCTTGAATTGGAGTCAAAGATTTAGAATCATCAAAGGAGTTGCTACAGGTTTGTTCTATCTTCATGAAGAATGGGAGCAAGTTGTGATTCATAGAGACATAAAGGCTAGTAATGTGCTATTAGATGGTGAATTGAATGGTAGATTGGGAGACTTTGGTCTTGCAAGGTTGTATGATCATGGTGTTGATCCACAGACAACTCATTTGGTTGGAACTATAGGGTATCTTGCTCCTGAGCATACTAGAACAGGTAAGGCCACTAAATATTCTGATGTGTTTGCTTTTGGTGCATTTCTCCTTGAAGTTGTTTGTGGTAGAAGGCCTATAAATCATGTAAATGAAAGTGAAACTATAATCCTAGTTGATTATGTGTTTGATTGTTGGAAAAGAGGTGAGATTCTTGAGGCAAAGGATATAAATCTAGGCACAGATTATAGTTCAGAAGAGGTAGAGTTGGTTTTGAAACTTGGCATGTTGTGCTCACATTCAGAACCTATGGCTAGACCAAGTATGAGACAAGTTGTGCAGTATTTGGAGATGGATATACCTCTGCCTGATTTGTCTTTGCTTAGTTTATCTTCTTCTGGGTTAGCTTTTGGACACAATGAATTTTTTGGGGACTTTCCAATGTCATATCCATCTTCTACAGACAAGACATTCACACAAACTTCTGTCTCTGTTACTGATTCACTTCTCTCTAGTGGTCGATGA 2013 0.3751 MSLKLVLVLYFLVTVVASKDVSFIYNNGFQSSHLYLDGIAELTSNGLLRLTNDTNQEKAHAFYPNPILFKNTSNGSVSSFSTTFVFAIRHEIPVISGHGIVFVVSPTKGLPNSLPSQYLGLFNKSNNGNSSNHVFGVELDTIQSSEFNDINGNHVGIDINDLKSATSTPAGYYDNNGQLKNLTLISGYPMQVWIEYDGEKKKIDVTLAPINVVKPKQPLLSIVKDLSPILHNSMYVGFSSATGSVHTSHYILGWSFRLNGQAQNFVISELPKLPRLGKKKESKFLIFGLPLILLSLVFMSILGAIYFIKRRKKFAELLEDWEDEYGPHRFKFKDLYFATKGFREKELLGVGGFGRVYKGVMPGSKLEVAVKRVSHESRQGMREFVSEIVSIGRLCHRNLVPLLGYCRRKGELLLVYDYMPNGSLDNYLYNQPKMSLNWSQRFRIIKGVATGLFYLHEEWEQVVIHRDIKASNVLLDGELNGRLGDFGLARLYDHGVDPQTTHLVGTIGYLAPEHTRTGKATKYSDVFAFGAFLLEVVCGRRPINHVNESETIILVDYVFDCWKRGEILEAKDINLGTDYSSEEVELVLKLGMLCSHSEPMARPSMRQVVQYLEMDIPLPDLSLLSLSSSGLAFGHNEFFGDFPMSYPSSTDKTFTQTSVSVTDSLLSSGR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1371g00002 670 CDD lectin_legume_LecRK_Arcelin_ConA 21 260 IPR001220 GO:0030246
Vivi1371g00002 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Vivi1371g00002 670 PANTHER - 29 616 - -
Vivi1371g00002 670 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Vivi1371g00002 670 CDD STKc_IRAK 348 613 - -
Vivi1371g00002 670 FunFam L-type lectin-domain containing receptor kinase V.9 20 263 - -
Vivi1371g00002 670 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Vivi1371g00002 670 ProSiteProfiles Protein kinase domain profile. 342 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1371g00002 670 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Vivi1371g00002 670 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1371g00002 670 Pfam Legume lectin domain 21 270 IPR001220 GO:0030246
Vivi1371g00002 670 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Vivi1371g00002 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 278 IPR013320 -
Vivi1371g00002 670 SUPERFAMILY Protein kinase-like (PK-like) 324 620 IPR011009 -
Vivi1371g00002 670 Gene3D - 19 270 - -
Vivi1371g00002 670 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1371g00002 670 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1371g00002 17 670 Receptor kinase-like Gene Family AT2G37710 66.768 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi1371g00002 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1371g00002 - - mtr:25498550 983.015