Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi136g00056 ATGAGCAACATAAGTATGGTTGAAGCAAAGCTTCCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAACTTGTGTGTGATTACTTGATGAAGAAGGTTACTCATAGTGATTCTCTTCTCATGATTGATGTTGATCTTAACAAGTGTGAACCATGGGATATTCCTGAAGCAGCATGTGTGGGAGGAAAGGAATGGTATTTCTATACACAAAGAGATCGCAAATATGCAACAGGCCTACGCACAAATCGTGCAACTGCATCAGGCTATTGGAAGGCCACTGGAAAAGACAGATCTATCCTTCGCAAGGGCACTCTTGTTGGCATGAGAAAAACATTAGTGTTCTATCAAGGAAGGGCACCAAAGGGAAGAAAAACTGAATGGGTTATGCATGAGTTTCGCATTGAAGGTCCTCATGGCCCTCCTAAATTTTCTTCTTCTAAGGAAGATTGGGTATTGTGTAGAGTCTTCTACAAAAACAGAGAAATTGCTACAAAACCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCATACATAAGTTTTGATCACCAAGCTCAATTCCACACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCAAAACCAAATCAATCCATTCTTCAACCCTACAACAAACATGGAACCAAAACTACCAACAGTCAACAATAACAACAATCCAACAACTACATTTGGAGGAGCATCTTATAGCTTAGACCCTTTGTCTTGTGATAGAAAGGTTTTAAAAGCTGTTTTGAGTCAACTCTCAAAAATGGAAAGAAACACTCTTGATAACAATAATAATAATAGTAGTAATCAAAATCTAAAAGGGTCATCACCAAGCTTTGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGCTATGCCCCATATGTGGAACAATTATTAA 945 0.3905 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSLLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRSILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKFSSSKEDWVLCRVFYKNREIATKPSMGSCYDDTGSSSLPALMDSYISFDHQAQFHTDEYEQVPCFSIFSQNQINPFFNPTTNMEPKLPTVNNNNNPTTTFGGASYSLDPLSCDRKVLKAVLSQLSKMERNTLDNNNNNSSNQNLKGSSPSFGEGSSESYLSEVAMPHMWNNY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi136g00056 314 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Vivi136g00056 314 MobiDBLite consensus disorder prediction 272 298 - -
Vivi136g00056 314 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Vivi136g00056 314 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Vivi136g00056 314 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Vivi136g00056 314 FunFam NAC domain-containing protein 100-like 20 162 - -
Vivi136g00056 314 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 264 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi136g00056 2 312 NAC Transcription Factor Family AT1G56010 58.537 4.85e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi136g00056 NAM 1.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi136g00056 - - gmx:100301890 531.561