Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi136g00055 ATGAGCAACATAAGTATGGTTGAAGCAAAGCTTCCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAACTTGTGTGTGATTACTTGATGAAGAAGGTTACTCATAGTGATTCTCTTCTCATGATTGATGTTGATCTTAACAAGTGTGAACCATGGGATATTCCTGCATGTGTGGGAGGAAAGGAATGGTATTTCTATACACAAAGAGATCGCAAATATGCAACAGGCCTACGCACAAATCGTGCAACTGCATCAGGCTATTGGAAGGCCACTGGAAAAGACAGATCTATCCTTCGCAAGGGCACTCTTGTTGGCATGAGAAAAACATTAGTGTTCTATCAAGGAAGGGCACCAAAGGGAAGAAAAACTGAATGGGTTATGCATGAGTTTCGCATTGAAGGTCCTCATGGCCCTCCTAAATTTTCTTCTTCTAAGGAAGATTGGGTATTGTGTAGAGTCTTCTACAAAAACAGAGAAATTGCTACAAAACCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCATACATAAGTTTTGATCACCAAGCTCAATTCCACACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCAAAACCAAATCAATCCATTCTTCAACCCTACAACAAACATGGAACCAAAACTACCAACAGTCAACAATAACAACAATCCAACAACTACATTTGGAGGAGCATCTTATAGCTTAGACCCTTTGTCTTGTGATAGAAAGGTTTTAAAAGCTGTTTTGAGTCAACTCTCAAAAATGGAAAGAAACACTCTTGATAACAATAATAATAATAGTAGTAATCAAAATCTAAAAGGGTCATCACCAAGCTTTGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGCTATGCCCCATATGTGGAACAATTATTAA 939 0.3898 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSLLMIDVDLNKCEPWDIPACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRSILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKFSSSKEDWVLCRVFYKNREIATKPSMGSCYDDTGSSSLPALMDSYISFDHQAQFHTDEYEQVPCFSIFSQNQINPFFNPTTNMEPKLPTVNNNNNPTTTFGGASYSLDPLSCDRKVLKAVLSQLSKMERNTLDNNNNNSSNQNLKGSSPSFGEGSSESYLSEVAMPHMWNNY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi136g00055 312 ProSiteProfiles NAC domain profile. 11 156 IPR003441 GO:0003677|GO:0006355
Vivi136g00055 312 MobiDBLite consensus disorder prediction 270 296 - -
Vivi136g00055 312 Pfam No apical meristem (NAM) protein 12 132 IPR003441 GO:0003677|GO:0006355
Vivi136g00055 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 262 - -
Vivi136g00055 312 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Vivi136g00055 312 SUPERFAMILY NAC domain 2 157 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi136g00055 2 310 NAC Transcription Factor Family AT1G56010 58.537 4.94e-126 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi136g00055 NAM 5.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi136g00055 - - gmx:100301890 524.628