Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi136g00038 ATGATTCATTCAACTACGAAATCATCAAAAGAGAAAGAAAACGATCGCGGCATCAGTTCGCACGTCCTCACCCTCCATCGCCGTCTTCTCCACGCCTTAAACCTGGGAACCAGATACTTTGATGACAAGACAAATAGATGGAAGTGGCAGTGTGTTAACATTGAAGTGCAGAAAAATGTACTCCGGTCAATTTCTGCGTTTCTTGATTCTATTGCAGGTGATGCACGTGTCATACGGCATTCCATCGTTAAGGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAGTGAGCCCTTGTTAAGCATGGCATCAAATGTGGCTGTGAAGTTAGTTAGTGTTTTACCGAGCCAACAGTTGCAATTGCGATTGTTGGATCTTGTCTATTGTCTATCATCCTTGCTATCTTCACATCAAGTAGAAGTTGCAATACCTTCTGCTACTGCTTTGAATTTGGTAATCTCAAATCTGAGTGCTACGAGTGAGAAGGCTGTTATTGAAGCACTGAAAGAAACAGAGGTTTCCGTTTGTATTGTTCAAAATATTAAAGACTGTGATGGGAAGAAAGTTGAATATTTTCTGGAGATGGCTTCACTTTTGAGTACAGTACTGTTGAGGTGGTCTTCATCTAGGTTCCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCATATAAAGACAGATAGTTCCATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGTGCAAAAACTCATCGAGGGTGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCAAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTTGTGTGGTGAAGCCCTTGTTGATGCCATAATTTGTGGGATGAGAGAGACAGGTCCGTCTTCCAAAAAAATTGAGAACAACTATGGTTCTGTATTAGTGGAAGCATGTAAGCTGGCTCTAATTACTCGTTGGGCTGGCGATCATCATATCAGGTTTTGGAAACAAGGAATTGATAAAGTCCTCCTTAGTCTTCTGATTGAAAATATTCACGATCAATCAACTGAACTTGTGTTGTCATTGGAAAAACAAATATCCATGGTGAAAGAGGGACTGAAAGTCAATTATCACGTTGCTGTGAGGAGTTACGTGTGGAACATTCTTGGGTGGCTTGTAATTCATTGTTCAGAAAATTCAAACCCTTACAGTTATACCCATGAGAGTGAACTCCACATCAACTTACTTATTATGTGTGCATGCTTCACTTTTGTGGATGCAATTCAAAAATGGTGCCGGATATGTCAAAATGACGTTGATGATAATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAATTATATTTCTTCACATGCTAGATTTGTATTATCTGATATACTAAAGGTCAAAGGCGATCCATGCTTGAAAAATTCACTACATACCATAGATTATTTATCATCTTTGAAAAGCTATAGTTCATTTGATAAACTTCAACTTATTATTAACTTAATTGGGTTAACTTGTCTTACAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAGAGGGATAAAGGCTGTTGTTCTTCTTGTCCAACGATGCTTAAGTAATGATGTTCATATGGAAAGGTCTGAAGTTGCTCCTCATTTGCATACTGTATTCCATAAAAGGTCTTGTTGCTGGACTGGTAAAGGAGGCTGGGAAGGTTCCAATATCCTTTTATTTTATGGTCTGTGGGGCATAGCTGAATTTCTTCATCAGTGTTGCCTTTTACCAGACAATCCTCAGCAATTTACTAGAGAGGTGACAAACATTAACACTGAATTAGTTAACAAACTTCATGATATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTTCCAAAAGGATCGGGAAATCTCTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGGATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTTCTACCTTCTCAAGTGTTATCTAGTAGTAAGAGTTCTAAAGAAATAACAGATTGTTTTGTTAGAGAGACCGTGAGAGAAGTTCGCTATTCTTCTCATGTTGATTATGAAGCGTTGTTGTTATTGTTGGAATATGTGTATTTGGGACACTTGCATGCAGCAGAAGAAGAAACTGTAAAGAAGCTCAAAGTTCTTGCTAAGCGTTGCAATCTACAACCTCTCTTGCAACTGCTTTGTAGACAATCTCCAAAGTGGGACGCACCTTTCCCCATCTTTAATCTTACTTCATCTCCTGATTCAGCTGGAAGTTATTTTTTTGATGTCATAATGGAAGCTAAATCGAATGAGTTTGTTGGATGTACATGTAATTTATGTCCTCACCCAGTACGGCATTTGCATGCTCACAAAGTTATATTGCAGTCTGGCTGTGACTATTTACAGGGTTTGTTCAGATCAGGAATGCAAGAGAGTCATTCACAAGTCATAAAGGTTGATATTAGCTGGGAAGCATTGGTTAAACTAGTACATTGGTTTTACTCTGATGAGCTGCCGAATCCTCCTTCTGGTTGTTTGTGGGTTAACATGGATGATCAAGAAAAGCTATTCCATTTGCAGCAATATGTGGAGCTTTGTTGGCTTGGTGAGTTCTGGATTTTGGAAAGTATTCAGGAAGCCTGCTGGAATGCGATTATGTCTTGTCTTGGTTCTTCTAAGCAGTTGTCCATTAAAATAATTAAAATGGCTTATAACCTCTCTTTGTGGAAGTTGGTTGACATTGCCGCAAACCTCATGGCTCCTTCATATAGGCAATTACGGGATTCTGGTGAACTTGAAGAATTTGATGAAGCACTAGTTCACTTCATTTATTCTGCTTCTATTGAACTTAACCATGAAGGTGAAAAACGCTTTAGGTGA 3072 0.3818 MIHSTTKSSKEKENDRGISSHVLTLHRRLLHALNLGTRYFDDKTNRWKWQCVNIEVQKNVLRSISAFLDSIAGDARVIRHSIVKESAADILGALLWILQCKSEPLLSMASNVAVKLVSVLPSQQLQLRLLDLVYCLSSLLSSHQVEVAIPSATALNLVISNLSATSEKAVIEALKETEVSVCIVQNIKDCDGKKVEYFLEMASLLSTVLLRWSSSRFPVCNDVELMKVLANMHIKTDSSIKLVLLKLYTSLALCDSVVQKLIEGGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDLCGEALVDAIICGMRETGPSSKKIENNYGSVLVEACKLALITRWAGDHHIRFWKQGIDKVLLSLLIENIHDQSTELVLSLEKQISMVKEGLKVNYHVAVRSYVWNILGWLVIHCSENSNPYSYTHESELHINLLIMCACFTFVDAIQKWCRICQNDVDDNFQSEPVSRAVLMMIYSPCNYISSHARFVLSDILKVKGDPCLKNSLHTIDYLSSLKSYSSFDKLQLIINLIGLTCLTSLPQYQRCIIESRGIKAVVLLVQRCLSNDVHMERSEVAPHLHTVFHKRSCCWTGKGGWEGSNILLFYGLWGIAEFLHQCCLLPDNPQQFTREVTNINTELVNKLHDICSSTSFSPGVKWYVSYILSYFGFYGFPNEFSKRIGKSLNKEEYADLRLIVANGDSVSVHGVILAVRCPSLLPSQVLSSSKSSKEITDCFVRETVREVRYSSHVDYEALLLLLEYVYLGHLHAAEEETVKKLKVLAKRCNLQPLLQLLCRQSPKWDAPFPIFNLTSSPDSAGSYFFDVIMEAKSNEFVGCTCNLCPHPVRHLHAHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALVKLVHWFYSDELPNPPSGCLWVNMDDQEKLFHLQQYVELCWLGEFWILESIQEACWNAIMSCLGSSKQLSIKIIKMAYNLSLWKLVDIAANLMAPSYRQLRDSGELEEFDEALVHFIYSASIELNHEGEKRFR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi136g00038 1023 SUPERFAMILY POZ domain 849 950 IPR011333 -
Vivi136g00038 1023 SUPERFAMILY POZ domain 673 798 IPR011333 -
Vivi136g00038 1023 SMART BTB_4 837 953 IPR000210 GO:0005515
Vivi136g00038 1023 SMART BTB_4 694 805 IPR000210 GO:0005515
Vivi136g00038 1023 ProSiteProfiles BTB domain profile. 694 774 IPR000210 GO:0005515
Vivi136g00038 1023 Pfam BTB/POZ domain 686 796 IPR000210 GO:0005515
Vivi136g00038 1023 Pfam BTB/POZ domain 849 912 IPR000210 GO:0005515
Vivi136g00038 1023 Gene3D Potassium Channel Kv1.1; Chain A 822 993 IPR011333 -
Vivi136g00038 1023 ProSiteProfiles BTB domain profile. 825 906 IPR000210 GO:0005515
Vivi136g00038 1023 SUPERFAMILY ARM repeat 54 680 IPR016024 -
Vivi136g00038 1023 CDD BTB_POZ_ZBTB_KLHL-like 849 923 - -
Vivi136g00038 1023 Gene3D Potassium Channel Kv1.1; Chain A 676 801 IPR011333 -
Vivi136g00038 1023 PANTHER OS06G0674800 PROTEIN 4 1017 IPR044953 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi136g00038 BTB 3.4e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi136g00038 - - mtr:25487018 1796.94