Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi136g00001 ATGGGTGTTAAAGATGATTTCAAGATGGATAATCAATATTTACAAGATGATGATGATGATGATGTTCCACTCCCTGGATTTAGATTCCATCCTACTGATCAAGAACTTGTCACTTTTTATCTTCAAAGAAAACTTGACAAGAAAGCTATTAGTATTGATCTCATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAATCTAGTGTACATGGAGCAGAAAAAGAAGGTTATTTTTTTTGCAAAAGAGGGAGAAAATATAGGAACAGCATTAGGCCAAATAGAGTAACTGGATCTGGATTCTGGAAAGCAACTGGAATAGATAAAGCAATATACTCAAATGGAGGAGAAGGAAATGATTGCATTGGACTCAAGAAAACGCTTGTTTACTATCGCGGTAGCGCTGGTAAGGGCACCAAAACGGATTGGATGATGCACGAGTTTCGTCTTCCGTCTAGTATTGCTACCAACACAAATCTTGCTCATGCTAAGTATGATAATGATGTTTCTCATGAAGCAGAAATTTGGACATTATGTAGAATTTTCAAAAGAAGTGTATCACAAAGGAAACAACAAATACATGAGATGAAACCATTAGCTACCAAGCGTCAGACTACTTATGAAAACAGCACTAGAATGAGCAGCAATATGGAGTTCATGTTAAATCAACAAACTTACATCAATTTTGGTTCAATCCATGAAGATCATCATAATCAGGATATACCAGTAAATAATTATGCAAATAATGGTCAAAGGAATCAATTTTATGTGAGTGAGTTGACCCCTTCAGTTCCACAGCAACCAGCTCAACAAATTTTAATACCATCTTCAAATTTTTGGATTCAGGAAGCTGCAAATGAGCTATTATCCTTTGATAATTGGGATGAGCTTGGATCAGTTGTGAAGTTTGCTGTTGATTCACCTAGTTTGTAA 942 0.3546 MGVKDDFKMDNQYLQDDDDDDVPLPGFRFHPTDQELVTFYLQRKLDKKAISIDLIKQIDIYKYDPWDLPKSSVHGAEKEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKAIYSNGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSSIATNTNLAHAKYDNDVSHEAEIWTLCRIFKRSVSQRKQQIHEMKPLATKRQTTYENSTRMSSNMEFMLNQQTYINFGSIHEDHHNQDIPVNNYANNGQRNQFYVSELTPSVPQQPAQQILIPSSNFWIQEAANELLSFDNWDELGSVVKFAVDSPSL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi136g00001 313 Gene3D NAC domain 32 192 IPR036093 GO:0003677|GO:0006355
Vivi136g00001 313 Pfam No apical meristem (NAM) protein 25 153 IPR003441 GO:0003677|GO:0006355
Vivi136g00001 313 FunFam NAC domain-containing protein 35 32 190 - -
Vivi136g00001 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 240 - -
Vivi136g00001 313 ProSiteProfiles NAC domain profile. 23 187 IPR003441 GO:0003677|GO:0006355
Vivi136g00001 313 SUPERFAMILY NAC domain 24 187 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi136g00001 20 195 NAC Transcription Factor Family AT5G39820 57.219 1.60e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi136g00001 NAM 6.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi136g00001 - - gmx:100790471 418.698