Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1367g00003 ATGGCGAGAAAATACCAAGGGCATGCTATTGGAATAGACCTTGGCACAACTTACTCGTGTGTTGCAGTATGGCAGGAACAACACTGTCGAGTTGAGATCATTCACAATGATCAAGGAAACAGAACTACACCATCTTTTATTGCATTCACCAAAGATCAAAGGTTGATATTGATAGGCGAGGCTGCCAAGAATCAAGCTGCTGCTAACCCTCAAAACACTGTCTTTGATGCTAAGAGGTTAATCGGTAGAAGTTTTAGTGATCCAGTTGTTCAAGATGACATTCTGTTATGGCCATTCAAAGTTACCGGTGTTAATGACAAACCTATGATTTCTGTTAAGTACAAGGGTCTGGAGAAGCACTTATGTGCCGAGGAAGTATCATCGATGGTGCTCTCAAAGATGCGACAAATTGCTGAGGCATATTTAGAATCACCAGTTAAGAATGCAGTTATTACTGTCCCAGCTTATTTTAATGATTCTCAGCGAAAAGCAACTATAGATGCCGGTGCTATTGCTGGCCTCAATGTCATGAGAGTAATGAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGACAAAAGAACTGACTGTGTTGAAGAACGTAAGATGTTTGTCTTTGATCTTGGTGGTGGCACATTTGATGTGTCTCTACTAACTATCAACAATAATGTCTATCAAGTTAAAGCAACTTCTGGAAACACTCACCTCGGAGGAGAAGACTTTGATAACAGAATGGTTAGCTACTTAGTACAAGAGTTTAATAGAAAGAACAAAGTGGATATTAGTGGAAATCCCAAAGCCTTGAGGAGATTGAGAACGGCTTGTGAGAGGGCAAAAAGATCACTTTCTTTCCTTGTTGTTACAACTATTGAGATAGATTCTTTATTTGAAGGCATTGATTTTTCTTCATCGATCAATAGGGCAAAATTTGAGGAGATGAATATGGATCTATTCGATGAGTGTATGAAGATTGTTGAAAGTTGTCTTCGTGGTGCTAAATTGGATAAGGGCACGGTAGATGATGTTGTTCTTGTTGGTGGATCTTCTAGGATTCCCAAAGTACAACAGCTATTACAAGACTTTTTTAACGGAAAGGAGTTGTGCATGAGCATTAATCCTGATGAGGCTGTAGCTTATGGTGCTGCTGTTCAGGCTGCATTGCTGAGTGAAGGCGTTAAGAGTGTTCCAAAGTTGGTGTTGCAGGATGTTACACCTTTGTCTCTTGGCAGGTCAATACTAGGAGATGTCATGGATGTGGTGATTCCAAGGAACACTTGCATTCCTGTCAAGAAGACTGGATCATATTATTCAACTGCAGATAACCAAACCAGTGACTTGATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATTTGCTTGGTTCTTTTACTCTTTACGACATTCCCCTTGCTCCTCGTGGCACCCTTCAATCAAATGTTTGTTTTGCTATTGATGAAAATGGAATTTTGACTGTTTCAGCTAATAATAATGTTTCTGGAGTTTCGAGAATGATCACAATAACCAATCACAGAGATAGATTGTCAAGTGAGGAAATTAATAAATTGATTCAAGAAGCTGAGAGTTACCATATTGAAGACAAGAAATTCCTAAGAAAGGCCAAAGCGATGAATGCATTGGATGACTACATTTACAAAATGAGAAATGCTTTACAGAAACAGGATATTAATCTAAAGCTCTCCTCTCAAGAAGTTGAGATTATCAAATCTACAATTGCTGTGATTACAAATTTGATTGATGAGAATAAGCAAGAGGTAGAAATAGATGTTTTGGAGGACCATCTAAAGGGACTTAAGAGTACCATGGAAGACATTTTAGCCAAGACTATTTAA 1863 0.3886 MARKYQGHAIGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSFIAFTKDQRLILIGEAAKNQAAANPQNTVFDAKRLIGRSFSDPVVQDDILLWPFKVTGVNDKPMISVKYKGLEKHLCAEEVSSMVLSKMRQIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGAIAGLNVMRVMNEPTAAAIAYGLDKRTDCVEERKMFVFDLGGGTFDVSLLTINNNVYQVKATSGNTHLGGEDFDNRMVSYLVQEFNRKNKVDISGNPKALRRLRTACERAKRSLSFLVVTTIEIDSLFEGIDFSSSINRAKFEEMNMDLFDECMKIVESCLRGAKLDKGTVDDVVLVGGSSRIPKVQQLLQDFFNGKELCMSINPDEAVAYGAAVQAALLSEGVKSVPKLVLQDVTPLSLGRSILGDVMDVVIPRNTCIPVKKTGSYYSTADNQTSDLIKVYEGERTRASDNNLLGSFTLYDIPLAPRGTLQSNVCFAIDENGILTVSANNNVSGVSRMITITNHRDRLSSEEINKLIQEAESYHIEDKKFLRKAKAMNALDDYIYKMRNALQKQDINLKLSSQEVEIIKSTIAVITNLIDENKQEVEIDVLEDHLKGLKSTMEDILAKTI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1367g00003 620 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 619 IPR029048 -
Vivi1367g00003 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vivi1367g00003 620 FunFam Heat shock protein 70 10 204 - -
Vivi1367g00003 620 Gene3D Actin; Chain A, domain 4 239 321 - -
Vivi1367g00003 620 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
Vivi1367g00003 620 Gene3D - 195 369 - -
Vivi1367g00003 620 Gene3D - 10 387 - -
Vivi1367g00003 620 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Vivi1367g00003 620 FunFam heat shock 70 kDa protein-like 75 129 - -
Vivi1367g00003 620 FunFam Heat shock 70 kDa 238 321 - -
Vivi1367g00003 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi1367g00003 620 PANTHER HEAT SHOCK PROTEIN 70KDA 9 571 IPR013126 GO:0005524|GO:0140662
Vivi1367g00003 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 551 IPR029047 -
Vivi1367g00003 620 SUPERFAMILY Actin-like ATPase domain 8 194 IPR043129 -
Vivi1367g00003 620 Coils Coil 598 618 - -
Vivi1367g00003 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 547 IPR029047 -
Vivi1367g00003 620 Pfam Hsp70 protein 9 617 IPR013126 GO:0005524|GO:0140662
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 212 222 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 149 169 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 372 392 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 398 417 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 62 70 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 340 356 - -
Vivi1367g00003 620 PRINTS 70kDa heat shock protein signature 479 495 - -
Vivi1367g00003 620 Gene3D - 75 129 - -
Vivi1367g00003 620 Gene3D - 548 620 IPR029048 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1367g00003 1 618 Calmodulin-binding Proteins AT3G12580 65.000 0.0 799