Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1359g00008 ATGGATTTAAGAGATTCATGGACTGTCTTCTTTCTGTTTTGTAGCTTCTTGGTTGTTGCTTTCTGTGTACAAGATGAATCTCATGAAACGGGTTTCTTGAGTCTATCATGTGGTGGAACAACAAGCTTCAATGATTCATCAAACATTTCATGGCTCTCAGACACTCCTTACATAACCAATGGAAAGACAACCACCATCAATTACCGCGATGGTTCCTTGTCGACAAACATCTCGGCTCGGTTCTTCCCTCATTCGAGAGGCCGCGCATGTTATCGAATACCAGCGAACAGTGCAACTAGTTTGATTCTTGTGAGAGCAAAATTTGTATACAAAAACTATGATGGACTTGAAAAACCACCTATTTTCTATGTTTCTCTTGGGACAGCTATTGCTGCTAAGGTAAACTTGGCCAAAAATGATCCATGGATAGAAGAGTTTCTCTGGGAAGTCAATAAGGATACATTGACATTCTGTTTGAATCCGATTCCAAGTGGTGGTTCGCCGGTAATTTCTTTACTTGAAATTAGGCCACTTCCTAAAGGGTCTTACGCAAAGGGTAAAGAAGATTTCCCGAATAAATTACTTCGGATGAGTTATAGAATTGATTGTGGACACATCAATGAGTCTATAAGGTATCCTATGGATCCATATGATAGAATATGGAATGGTGATAGAAGTTTCATACCTTTTCATGCTACAAAAGGGTTTAAGATTCATAATAGCTTCACTCAATCCAATATTGTGGAGAAACCGCCATCTTCTGTTCTTCAAACAGGAAGAGTCTTGGCACGGCAAAACACGATGGCGTATAACCTCCCTCTCGAGGGGTTAGGGGACTACTACATCATCCTTTATTTTGCTGCAATTCTTCCCGTGTTCCCTTCATTTGATGTGTTCATAAACGGAGATATTGTAAAGTCAAACTATACAATAAGAAGATCAGAAATCAGTGCTTTATATATTACTAGAAAGAGGATCAACAATTTGAATATAACACTAAGAAGTGTCAACTTCTACCCTCAGATCAATGCATTTGAGGTGTATAATATGGTTGATATCCCGCCAGAAGCCTCCTCAACCACAGTTTCAGCAATGCAAGTTATTCAACAATCGATTGGCTTGGATCTAGGATGGCAAGACGATCCATGCTCGCCTTTTCCATGGGATCACATAGATTGCGAAGGAAACTTAGTTACATCATTGACTCTCTCAGACATAAACTTGAGATCGATCAGTCCAACATTCGGCGACTTGTTGGACCTTAAAACATTGGATTTGCACAACACATCACTTGCAGGAGACATCCAGAATTTGGGTAGCTTGCAAAGTCTTGCAAAACTGAACCTTAGTTTCAATCAGCTTACCTCCTTTGGTGTAGAGCTGGAAAACTTGATAAGACTTCAAATTTTAGACTTGCAAAGTAATAGTCTCCAAGGATTAGTGCCTGATAGCTTGGGAGAGATAGAAAACCTTCACTTACTGAATCTAGAAAACAACAAACTACAAGGTCCACTTCCACAGTCTTTGAACAAAGACACTATAGAGATCAGAACATCTGGGAATTTGTGCCTTACTTTTTCCACAGCCGTGTGCGATGATGCATCATCCGATGCTCCTTCAATTGAAGCACCACAATTGATTACAGTTCCCGGAAGGAAGAACCATGGACAAAATCATCTAGCAATAATACTAGGCACAGTTGGAGGAGCTGCACTTACCATTTTCCTAATATTTCTTTCAGTGTTTGTATACAAAGCTAAAAGAAGATATGAAGCCTTACACAAAACTAGAGAAGAAACTGATGTGAGGAACTGGGGCACAGAAAGAATTTTTACCTACAAAGAAATTAAAGTAGCTACTAGCAGTTTTAAGGAAATCATAGGAAGAGGAAGTTTTGGATCTGTTTACCTTGGAAGGCTTCCAAACGGAAAATCAGTTGCTGTTAAAGTTCGGTTCGATAAATCCCAACTTGGGGTTGATTCTTTTATCAATGAGATTCATCTCCTGTCAAAAATCCGCCATCAAAATCTTGTGTCTTTGGAAGGATTCTGTCATGAATCAAAGCATCAGATATTGGTGTATGAATACTTGCCTGGTGGATCCCTTGCCGATCACCTTTACGGTGCAAACAGCCATAAAACTCCCTTAAGCTGGATGCGAAGGTTGAAAATTGCTGTCGATGCAGCAAAAGGATTGGATTATTTGCATAACGGAAGCGAACCAAGAATCATACACCGTGATATCAAGTGTAGTAACATCCTCTTGGACATAGATTTGAATGCCAAGGTCTGTGATTTTGGCCTCTCTAAGCAGGTAACCAAAGCAGATGCAACTCATGTCACCACCGTTGTCAAGGGAACTGCTGGTTATCTAGATCCAGAGTATTATTCTACTCAACAGCTTACTGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTATTGGAACTCATTTGTGGAAGAGAACCATTGATTCACTCGGGGACTCCTGATTCATTCAATTTGGTTTTATGGGCAAAACCCTATTTACAGGCGGGTGCATTTGAAATTGTGGATGAAAGAATACAAGGAACTTTTGATCTAGAGAGCATGAAGAAGGCAGCCTCCATAGCTGTAAATTCAGTGGAAAGAGACGCATCACAGAGACCACCCATTTCTGAAGTATTAGCCGAGCTAAGGGAAGCTTATAATATTCAGCTCAGATTTTCGGAGTCTTAA 2718 0.3999 MDLRDSWTVFFLFCSFLVVAFCVQDESHETGFLSLSCGGTTSFNDSSNISWLSDTPYITNGKTTTINYRDGSLSTNISARFFPHSRGRACYRIPANSATSLILVRAKFVYKNYDGLEKPPIFYVSLGTAIAAKVNLAKNDPWIEEFLWEVNKDTLTFCLNPIPSGGSPVISLLEIRPLPKGSYAKGKEDFPNKLLRMSYRIDCGHINESIRYPMDPYDRIWNGDRSFIPFHATKGFKIHNSFTQSNIVEKPPSSVLQTGRVLARQNTMAYNLPLEGLGDYYIILYFAAILPVFPSFDVFINGDIVKSNYTIRRSEISALYITRKRINNLNITLRSVNFYPQINAFEVYNMVDIPPEASSTTVSAMQVIQQSIGLDLGWQDDPCSPFPWDHIDCEGNLVTSLTLSDINLRSISPTFGDLLDLKTLDLHNTSLAGDIQNLGSLQSLAKLNLSFNQLTSFGVELENLIRLQILDLQSNSLQGLVPDSLGEIENLHLLNLENNKLQGPLPQSLNKDTIEIRTSGNLCLTFSTAVCDDASSDAPSIEAPQLITVPGRKNHGQNHLAIILGTVGGAALTIFLIFLSVFVYKAKRRYEALHKTREETDVRNWGTERIFTYKEIKVATSSFKEIIGRGSFGSVYLGRLPNGKSVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVSLEGFCHESKHQILVYEYLPGGSLADHLYGANSHKTPLSWMRRLKIAVDAAKGLDYLHNGSEPRIIHRDIKCSNILLDIDLNAKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLIHSGTPDSFNLVLWAKPYLQAGAFEIVDERIQGTFDLESMKKAASIAVNSVERDASQRPPISEVLAELREAYNIQLRFSES 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1359g00008 905 ProSiteProfiles Protein kinase domain profile. 621 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1359g00008 905 CDD STKc_IRAK 627 892 - -
Vivi1359g00008 905 SUPERFAMILY L domain-like 363 511 - -
Vivi1359g00008 905 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Vivi1359g00008 905 Gene3D - 195 351 - -
Vivi1359g00008 905 Pfam Malectin-like domain 35 349 IPR024788 -
Vivi1359g00008 905 SMART serkin_6 621 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1359g00008 905 SUPERFAMILY Protein kinase-like (PK-like) 601 890 IPR011009 -
Vivi1359g00008 905 Pfam Leucine rich repeat 443 501 IPR001611 GO:0005515
Vivi1359g00008 905 Gene3D Transferase(Phosphotransferase) domain 1 697 902 - -
Vivi1359g00008 905 Gene3D Ribonuclease Inhibitor 362 533 IPR032675 -
Vivi1359g00008 905 PANTHER OS07G0107800 PROTEIN-RELATED 460 896 - -
Vivi1359g00008 905 Gene3D Phosphorylase Kinase; domain 1 593 696 - -
Vivi1359g00008 905 FunFam serine/threonine-protein kinase PBS1-like 589 696 - -
Vivi1359g00008 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Vivi1359g00008 905 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 697 904 - -
Vivi1359g00008 905 Pfam Protein tyrosine and serine/threonine kinase 623 891 IPR001245 GO:0004672|GO:0006468
Vivi1359g00008 905 ProSiteProfiles Leucine-rich repeat profile. 443 465 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1359g00008 17 902 Receptor kinase-like Gene Family AT5G48740 62.345 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi1359g00008 Malectin_like 8.4e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1359g00008 - - aprc:113850446 1416.36