Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1359g00007 ATGAAGGAAACAACAACAGGAGCACCTTCTTCTTCATCTTCTTCATGGAATAGGCTCCCTCCCATGCCTCCACAAAGATTTGAAGATAGTGATGAAGACTTATTCGAAGTTCCAGATGTAGAAGCTACACAATGTCAAAGTGTTCATTCTGAAGCAACAAATCAAAACAATCAAAACAATGCAACAGATCCTCAACTTCAAGCCGGAAAGCGTCGTCGTGGAAGAAACCCGGTCGATAAAGAGTACAGACGACTCAAAAGGTTGCTAAGGAATAGGGTCTCTGCCCAACAAGCTAGAGAAAGAAAGAAAGTGTATGTGAATGAGTTAGAATCAAGAGCTAAAGAAATGGAAGATAAGAACTCCAATTTAGAAGAACGTATTTCAACATTGATGAATGAGAACACCATGCTCAGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGCAATGAAGGTTAG 465 0.4 MKETTTGAPSSSSSSWNRLPPMPPQRFEDSDEDLFEVPDVEATQCQSVHSEATNQNNQNNATDPQLQAGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNELESRAKEMEDKNSNLEERISTLMNENTMLRKVLMNTRPKVDESNEG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1359g00007 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Vivi1359g00007 154 MobiDBLite consensus disorder prediction 1 20 - -
Vivi1359g00007 154 Coils Coil 99 140 - -
Vivi1359g00007 154 CDD bZIP_HY5-like 93 134 - -
Vivi1359g00007 154 MobiDBLite consensus disorder prediction 68 83 - -
Vivi1359g00007 154 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 7 151 IPR044280 GO:0000981|GO:0045944
Vivi1359g00007 154 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Vivi1359g00007 154 MobiDBLite consensus disorder prediction 1 83 - -
Vivi1359g00007 154 Gene3D Single helix bin 102 143 - -
Vivi1359g00007 154 FunFam Transcription factor HY5 102 143 - -
Vivi1359g00007 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Vivi1359g00007 154 MobiDBLite consensus disorder prediction 43 66 - -
Vivi1359g00007 154 Pfam bZIP transcription factor 80 139 IPR004827 GO:0003700|GO:0006355
Vivi1359g00007 154 SUPERFAMILY Leucine zipper domain 82 142 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1359g00007 66 150 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 76.471 3.10e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1359g00007 bZIP_1 5.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1359g00007 K16241 - gmx:100783826 191.43