Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1348g00001 ATGGAGTACGGTGGAGGCTCGAAAATAACCGGGATTAGGCAGATTGTGAGACTAAGAGAAATAATTCATAAATGGCAAAGTGTCACAATAGGCGCAAGAACTTCCCGCCTAAAAATTGAAGAATCTCAGGGTAGCAGCAAATCTCCAATAATCAACAAAAGAATAACAAATCTCATAAGTTGTGACTCCGATGACGAAAGCTGCAAAACTCCAGAACCACCACCTGATGTGCCAAAAGGTTACTTGGCGGTCTATGTTGGACCCGAGCTTCGACGGTTCATCATTCCAACTAGCTACCTTAGCCATCCCCTATTCAAACTGTTGCTTGAAAAGGCTGCTGAGGAATTCGGATTTGATCAGAGCGGCGGGCTCACGATACCGTGCGAGATTGAGACCTTTAAATATCTACTCAAATGCATTGAGGCCCAGGAGAAAGAAGAACAACATGATGACAGCTTGTCTGGAAACTCAGAAACAGAAACAGAAACAGAAACAGAAGAAACCTTGGAAGAGTAA 516 0.436 MEYGGGSKITGIRQIVRLREIIHKWQSVTIGARTSRLKIEESQGSSKSPIINKRITNLISCDSDDESCKTPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHPLFKLLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCIEAQEKEEQHDDSLSGNSETETETETEETLEE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1348g00001 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 53 136 IPR003676 GO:0009733
Vivi1348g00001 171 MobiDBLite consensus disorder prediction 146 171 - -
Vivi1348g00001 171 Pfam Auxin responsive protein 60 140 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1348g00001 1 162 Calmodulin-binding Proteins AT3G43120 60.976 1.63e-69 206