Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1330g00007 ATGGCTGATAAACTTTCTCAATGCACCTCGGGTGGAAGATGTCTCTCTGTTGAATATACTGATAGAGTTGGAGAGGTTGCTAAGAAGCATGGATTGAAGATTCACATTGATGGAGCCCGTATTTTTAATGCAGCAGTTCTTGCTCCTAATACTTTGGAACGTGTTGCGCCACTGACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTCGTTATTGGATTTTCAATAGTGGTGTTTGGCAACAAGATATCTACACAAACTGGCATTGGAACCGTCGGGTTGGGAACTTGGCAGGCCGATCCTGGCCTCGTCGGTCAAGCCGTTGCTACCGCTATCAAGGCTGGTTACCGTCACATTGATGGCTCTCCAATCTACGGCAATGAGAAAGAGATTGGTTCTATATCGAAGAAACTGTTTGATGATGGCGTAATGAAACGTGAAGATTTGTTTATTACCTCGAAACTCTGTGTGAAGACTTGTCAAGGATGTTCAGGCTATTTCCTTCAAATGTTTTCCTTCAAACGTTTAGTGTGA 534 0.4326 MADKLSQCTSGGRCLSVEYTDRVGEVAKKHGLKIHIDGARIFNAAVLAPNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTVGLGTWQADPGLVGQAVATAIKAGYRHIDGSPIYGNEKEIGSISKKLFDDGVMKREDLFITSKLCVKTCQGCSGYFLQMFSFKRLV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1330g00007 177 PANTHER ALDO/KETO REDUCTASE 84 157 - -
Vivi1330g00007 177 ProSitePatterns Aldo/keto reductase family signature 1. 115 132 IPR018170 GO:0016491
Vivi1330g00007 177 Pfam Aldo/keto reductase family 88 155 IPR023210 -
Vivi1330g00007 177 Gene3D - 85 170 IPR036812 -
Vivi1330g00007 177 Gene3D - 4 84 IPR015421 GO:0003824
Vivi1330g00007 177 SUPERFAMILY NAD(P)-linked oxidoreductase 84 157 IPR036812 -
Vivi1330g00007 177 Pfam Beta-eliminating lyase 9 90 IPR001597 GO:0006520|GO:0016829
Vivi1330g00007 177 Pfam Triose-phosphate Transporter family 30 91 IPR004853 -
Vivi1330g00007 177 SUPERFAMILY PLP-dependent transferases 6 81 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1330g00007 47 91 Antiporters AT5G46110 95.556 1.84e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1330g00007 K00002 - vvo:131604307 131.339